Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0543 ATGAAGATGATTCATATGATGAAGGAGGACATGAAAATGCACATGAATCTCTATTGGGGAAAAGATGCTATAATACTTTTCCCTGGGTGGCCTAACCAAAGTCTTGGCATGTACATTTTAGCTCTATCTTTTGTGTTTTTCCTTGCATTGGTTGTTGAGTTTTTGCCTAACAAATCAACCATCAAGCAAGGGACAAATCATATCAAAGGAGGGTTGATTCAGGCTATTATATACTTTTTTCGTATTAGTTTCCTTTACTTGGTTATGCTTGCTGTTATGTCTTTCAATATAGGAATCTTCATTGCTGCTGTTGTTGGTCATACCATTGGATTCTTTTTAGTCAAGTCTCATGATATTTTTGCTGCCAACAAAGAACAAAATCGCGAGTCCGCCATGACTATTGATGACATTTAG 414 0.3647 MKMIHMMKEDMKMHMNLYWGKDAIILFPGWPNQSLGMYILALSFVFFLALVVEFLPNKSTIKQGTNHIKGGLIQAIIYFFRISFLYLVMLAVMSFNIGIFIAAVVGHTIGFFLVKSHDIFAANKEQNRESAMTIDDI* 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0543 137 Pfam Ctr copper transporter family 64 113 IPR007274 GO:0005375|GO:0016021|GO:0035434
Mtr4g0543 137 Pfam Ctr copper transporter family 17 56 IPR007274 GO:0005375|GO:0016021|GO:0035434
Mtr4g0543 137 PANTHER CTR FAMILY COPPER TRANSPORTER 1 133 - -
Mtr4g0543 137 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 1 133 IPR007274 GO:0005375|GO:0016021|GO:0035434
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0543 Mtr-Chr4 6787141 6788000 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g0543 17 130 Inorganic Solute Cotransporters AT5G59030 45.299 3.09e-30 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0543 K14686 - gmx:100808693 160.614