Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0521 ATGGCGGCGCAAATGACGGGAAGGAGTAGTAGCAGCAGTAGGATTGTAGGAGATTATGTAGTTGGGAAGCAAATTGGAGCGGGTTCGTTTTCAGTTGTGTGGCATGCGAGACACAAAGTTCATGGAACTGAAGTTGCTATTAAAGAGATCGCTACGTTAAGATTGAATAAGAAGTTGCAAGAGAGTCTTATGTCTGAGATTTTTATTCTTAAGAGAATTAATCATCCTAATATCATTTCTTTGCATGATATCATTCAGGCTCCTGGGAAGATACATCTTGTGTTAGAATACTGTAAAGGGGGTGATCTTTCTTTGTACATTCAACGCCATGGAAGGGTACCGGAGGCAACGGCAAAGCATTTTATGCTTCAGCTGGCTGCTGGCCTACAAGTTCTTCGGGATAATAACCTTATTCATCGAGATTTGAAACCACAGAATCTTCTTCTCTCCAGAAATGATGAGAAGGCAGTTCTGAAGATCGCTGACTTTGGATTTGCAAGATCTCTGCAACCGAGGGGCCTTGCAGAAACATTATGTGGTTCACCACTCTACATGGCTCCAGAAATCATGCAACTGCAGAAATATGATGCGAAGGCAGATCTCTGGAGTGTTGGAGCAATCTTATATCAGTTTGTTACAGGGAAAACACCTTTTACTGGAAACAATCAAATACAGTTACTACAGAATATTGTGAATTCAACAGAATTGCAATTTCCACCGGATAGCCCAAGTTTAAGTTCTGAGTGCAAAGATTTGTGTCAGAAATTACTACGCCGTAATCCAGTGGAACGTCTAACTTTTGAAGAATTCTTTAACCACCCATTCCTTAATCCACAGCAAACAAAACAGGATGAACCATTATTAAGGAATAAAAGCTCTCCAAGGCCGGTAAGTGGGTTCTGTTCACCAAAGACTGACCCTTTGAGAAGAACCGAGGAAAATTATCAAGAGGATTGCTTACCTTTCATTCTAGATGATGATTCCAGCAGACCTGCAGGGAATACATTGTTTTCAAAGAAGAAGTCCTCAATAAAGTCTACCTTTGGATTTGATTTAAATACAAAATTAGAGAAAGCAGAGTCAACTCCTGTTTCTAATAATGTAAATTCTGCTTCCAGATATAGTAGTGTAACACAGAGACTTGAAAACACTTTTAAAAGATTGGACAACCATAAAATTTCAGGAAGAAATCTCACTAGTTCTCTAGAATCTCCAGAACAGATATTTGCAAACCCTTATCCAAGAGTTACAGATTCACTTGAGAATATTGATCAAGAATATGTTCTCGTGTCTGGGCCCCCTATGGATGTTTCATCTTCAGTGAATGCTTCAAAGCCCAGCCATTCCTTATTTAGGTCAGGTAGCTTTCCTCAAGAGTCTTCTAATACAATCACTAGAATAAGTGCTCCAATGCAAATCGTTGGTGCATCTACCAATAGCATGTGCCAAATTGGAAGTTCAGGTAGTCAGGACTCTGCTCCTGGGACCTCACATGGATCAATGGATACAGGTGATGAACAGCCATCAACTCACTGCATGACAAGGGTAAAATCATTGCAAGAGTATGCATCTGCCATCACAGAATTAGTTAATGAAAAGGTTGAGGCAAGAAAGCAGTTAGAAGCATTTTCTATTCAGCTTGTAATTCTTGCGATTTGGAAGCAAGCACTGCACATATGCCATACACAGGCTGCTTCAGCCATGGAAGGAAGTCCAAGTCAAGAAGCTTCAAGATATAGGAGGACCAACAGTAAGAAGCAAGGCAGTCCTGATTCAGAAGAATGTCTTGATGAAAACACCCAAGGGACGAAGGATTTATTATCTCAAATTGAAAGTGATTTTTTGAGGGAATTTGAGCATGCCGAAGAACTTGCCAAGACCATTGAGCCTGGAAATACAGAGATGCCAGATGCAATGGAGACAATATTTCAAGCTGCCCTTGCTTTTGGGAGACATGGGGGAGTAGAAGAGCTCATGGGTGATACAGAAAGTGCTGCTGCATTATATTCAAAAGCCGTCCGTCTATTGGTTTTCCTTCTAGTGGAAGGACCATCTCTGATCCTCAACCCTCCATTTTCATTAACAAACTCAGACCGTTACAGGCTACGGAATTACATTGATATTCTTAATAACAGACAGGGTTATTCAAGGTCTCAGAGAATGACACTTCTCAAGGGCGATGATAGTCAAGGCATCTTTAAGGAAAAGTTTTAG 2214 0.4065 MAAQMTGRSSSSSRIVGDYVVGKQIGAGSFSVVWHARHKVHGTEVAIKEIATLRLNKKLQESLMSEIFILKRINHPNIISLHDIIQAPGKIHLVLEYCKGGDLSLYIQRHGRVPEATAKHFMLQLAAGLQVLRDNNLIHRDLKPQNLLLSRNDEKAVLKIADFGFARSLQPRGLAETLCGSPLYMAPEIMQLQKYDAKADLWSVGAILYQFVTGKTPFTGNNQIQLLQNIVNSTELQFPPDSPSLSSECKDLCQKLLRRNPVERLTFEEFFNHPFLNPQQTKQDEPLLRNKSSPRPVSGFCSPKTDPLRRTEENYQEDCLPFILDDDSSRPAGNTLFSKKKSSIKSTFGFDLNTKLEKAESTPVSNNVNSASRYSSVTQRLENTFKRLDNHKISGRNLTSSLESPEQIFANPYPRVTDSLENIDQEYVLVSGPPMDVSSSVNASKPSHSLFRSGSFPQESSNTITRISAPMQIVGASTNSMCQIGSSGSQDSAPGTSHGSMDTGDEQPSTHCMTRVKSLQEYASAITELVNEKVEARKQLEAFSIQLVILAIWKQALHICHTQAASAMEGSPSQEASRYRRTNSKKQGSPDSEECLDENTQGTKDLLSQIESDFLREFEHAEELAKTIEPGNTEMPDAMETIFQAALAFGRHGGVEELMGDTESAAALYSKAVRLLVFLLVEGPSLILNPPFSLTNSDRYRLRNYIDILNNRQGYSRSQRMTLLKGDDSQGIFKEKF* 738
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0521 737 Pfam Protein kinase domain 19 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g0521 737 MobiDBLite consensus disorder prediction 579 599 - -
Mtr4g0521 737 PANTHER SERINE/THREONINE-PROTEIN KINASE ATG1B 10 711 - -
Mtr4g0521 737 Coils Coil 519 546 - -
Mtr4g0521 737 MobiDBLite consensus disorder prediction 480 510 - -
Mtr4g0521 737 ProSitePatterns Serine/Threonine protein kinases active-site signature. 137 149 IPR008271 GO:0004672|GO:0006468
Mtr4g0521 737 MobiDBLite consensus disorder prediction 278 308 - -
Mtr4g0521 737 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 10 711 IPR045269 GO:0004674|GO:0006914
Mtr4g0521 737 CDD STKc_ATG1_ULK_like 25 275 - -
Mtr4g0521 737 SUPERFAMILY Protein kinase-like (PK-like) 15 277 IPR011009 -
Mtr4g0521 737 MobiDBLite consensus disorder prediction 436 461 - -
Mtr4g0521 737 ProSitePatterns Protein kinases ATP-binding region signature. 25 48 IPR017441 GO:0005524
Mtr4g0521 737 SMART serkin_6 19 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g0521 737 Gene3D Transferase(Phosphotransferase) domain 1 9 317 - -
Mtr4g0521 737 MobiDBLite consensus disorder prediction 564 599 - -
Mtr4g0521 737 ProSiteProfiles Protein kinase domain profile. 19 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Mtr4g0521 Mtr-Chr4 6525980 6534047 Dispersed/Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g0521 6 283 CBL-interacting serine-threonine protein kinases AT2G30360 35.563 9.29e-53 187
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-3 Mtr4g0521 Pkinase 7.4e-73 CL0016