Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0495 ATGGGGTGTTTTACTATATTGAAGAGAAAGAAGAAAAAGCCTGATCAGATTGTGTATGTAAAACGCGTAAGCCCTGGCGAAGATTCACCTACAGTACTGCCCGAACCCCAAACTCATACCCGCTCACTCCAGTCTGCGCCTCCTAGTTTTAAGATCAGAGTGAAACCCATTCAACCTAGCAATAAAGCCACTAACAATAGAATACGAGCATTGTCTGCTCCATCGAGTCTTGATGATGCAGAACAAGATGCATTGGCCACCATTGAGTATGAAGAACAAGAAGGGTCAAAATACCGAACTGGATCATGGAAGGAGCAGCGTTCGCCTAGTCCACAACCATTACCGCTTCCATCTCCTAAGGGTGGTGGTACATTGAAGACTGTTGGAAGCTTTAAGTTGGGGATAGCTAGTAGTCCTTTATATGCTTCTGGACCTTTGCCGCTTCCACCAACTGGGTCACTGAGAAACTTTTCTTATGATGAACTTGCTGCTGCTTGCCTCAATTTCTCTTCAGATCGATACATGTCAGAATCTCTTTCATCCACCATGTATAAAGCTTCCTTTGGTGATGATACCTCAACTTCAAGTTCAAAGAAGTTTGAAGCTACTGTCACACGCCTTCGCCCATCATCTCAGGGCCTGAAGGAATTCATAAATGAGGTTAATACTCTTGCATCATTGCAGCATCCGAACCTCTGTAGATTGCTAGGATTTCACGCAGGTGATGGTTCAGAGCATAGAATGTTGGTTTATGAGAGGCTATACCATGGAAGCTTGGACCGCTTATTGTATGGGAGATCTGATGGGCCATCAATTGATTGGAATACAAGAATGAAAATTGCAATATGTGCTGCACTAGGTCTTTCTTTCTTGCATGAAGAAGGGCCTTTTCAGGCAATGTATAATGAATTTTCAACAGCTAACATTCAGATTGACAAAGATTTCAGTGCAAAGCTTTCAGGATATGGTTGTGTTGGACATGTTCCGAAGGAAGAGATTTCAAGCAGTTCATCTGCCGTTGGAAACCTATCGATGGAGACACTGGAGAAAGGAATGCTTACTCCGAAAAGCAATGTATGGAGTTTCGGAATTTTCCTTCTAGAGCTACTTACAGGAAGAAAGAATCTCGATAGCCGTCACCCCAAGGAAGAGAGAAATTTGGTGAAGTGGAGCAGGCCTTTCCTGTCTGATAATCATCGTTTGTCAATGATCATGGATCCTCAACTTAAAGGTCGCTTTCCTTCTAAAGCGGCGAGTACAATAGCTAACATTGCACAAAGATGCCTTCAAATGGAGCCATCAGAACGACCAACCATGGGAACAGTTGTTGAGCAGCTGAAAAAGATACAAGATTTGAAGCATTCTAGCAGATTCCCGCTGCAAGAACCTGCACAAATGTCGAGATCACCAAGTCTTAACGGTATCAACCACCCTGCACCAAGGCCGAGTTTCTCTCCATCACCATCATCCAGAGCCCTGGTATCTGTCTCACCTCCAAGATGGTCGGGAGTGTCAATTCAACTTCCACCTCGCGCGTTTTCTTCAACCCTCTATTTGGAGGAGCTTGATAGGCAAGAAAGCCGCAAGTCAGCTTCAGCCTCTAGGAAGGCTAGTGTTGAAGGATTTTGA 1629 0.4432 MGCFTILKRKKKKPDQIVYVKRVSPGEDSPTVLPEPQTHTRSLQSAPPSFKIRVKPIQPSNKATNNRIRALSAPSSLDDAEQDALATIEYEEQEGSKYRTGSWKEQRSPSPQPLPLPSPKGGGTLKTVGSFKLGIASSPLYASGPLPLPPTGSLRNFSYDELAAACLNFSSDRYMSESLSSTMYKASFGDDTSTSSSKKFEATVTRLRPSSQGLKEFINEVNTLASLQHPNLCRLLGFHAGDGSEHRMLVYERLYHGSLDRLLYGRSDGPSIDWNTRMKIAICAALGLSFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCVGHVPKEEISSSSSAVGNLSMETLEKGMLTPKSNVWSFGIFLLELLTGRKNLDSRHPKEERNLVKWSRPFLSDNHRLSMIMDPQLKGRFPSKAASTIANIAQRCLQMEPSERPTMGTVVEQLKKIQDLKHSSRFPLQEPAQMSRSPSLNGINHPAPRPSFSPSPSSRALVSVSPPRWSGVSIQLPPRAFSSTLYLEELDRQESRKSASASRKASVEGF* 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0495 542 Pfam Protein tyrosine and serine/threonine kinase 196 446 IPR001245 GO:0004672|GO:0006468
Mtr4g0495 542 PANTHER OS01G0822200 PROTEIN 44 541 - -
Mtr4g0495 542 ProSiteProfiles Protein kinase domain profile. 169 457 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g0495 542 MobiDBLite consensus disorder prediction 31 47 - -
Mtr4g0495 542 Gene3D Phosphorylase Kinase; domain 1 150 252 - -
Mtr4g0495 542 MobiDBLite consensus disorder prediction 521 542 - -
Mtr4g0495 542 MobiDBLite consensus disorder prediction 456 506 - -
Mtr4g0495 542 PANTHER OS01G0588500 PROTEIN-RELATED 44 541 - -
Mtr4g0495 542 SUPERFAMILY Protein kinase-like (PK-like) 148 456 IPR011009 -
Mtr4g0495 542 MobiDBLite consensus disorder prediction 460 506 - -
Mtr4g0495 542 Gene3D Transferase(Phosphotransferase) domain 1 254 466 - -
Mtr4g0495 542 MobiDBLite consensus disorder prediction 21 123 - -
Mtr4g0495 542 MobiDBLite consensus disorder prediction 58 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0495 Mtr-Chr4 6258181 6263196 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g0495 148 450 Receptor kinase-like Gene Family AT4G02010 37.338 2.34e-57 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-II Mtr4g0495 PK_Tyr_Ser-Thr 1.4e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0495 - - gmx:100809117 819.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g1799 7 34026622 34030983 Mtr4g0495 4 6258181 6263196 PCT