Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0489 ATGGCAGCAACCTCGCCGATAAGAAGTTATTCCGTCGCCGCCATGCTTGCACCTCGTCCCGTTCTCACAAAAAGAAATCACTTCCGAGGCTATACATGGCAAATTTGGCTGCTATGGACACTAAAAGAACATGGTGTGATTAACCTCAATCATGCTGCATATACTGATCTGGACAAGTCTACTTCATTTTCTGGTGTTTATGATGGTCATGAAGGAGATATAGGAACATCTCTTCAACAAGCTTTTCTAAGAGTGGATGAGATGATGCGTGGTCAAAGAGGATGGAGGGAGCTATCGATCTTGGGAGATAAGATAAACAAGTTCAGTGGGATGATAGAAGGGTTGATTTGGTCTCCACGAAGCAGCAAGGGTATTAACCGAGTTGATGATTGGGCCTTTGAGGAGGGACCTCATTCTGATTTTGCTGGACCAACTTCAGGAAGCACAGCCTGTGTTGCAGTTATTAGAAACAACCAAGTTGTTGTTTCAAATGCTGGTGATTCCCGTTGTGTAATATCTCGGAAGGGCCAGATGTAG 537 0.4451 MAATSPIRSYSVAAMLAPRPVLTKRNHFRGYTWQIWLLWTLKEHGVINLNHAAYTDLDKSTSFSGVYDGHEGDIGTSLQQAFLRVDEMMRGQRGWRELSILGDKINKFSGMIEGLIWSPRSSKGINRVDDWAFEEGPHSDFAGPTSGSTACVAVIRNNQVVVSNAGDSRCVISRKGQM* 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0489 178 Gene3D - 48 178 IPR036457 -
Mtr4g0489 178 PANTHER PROTEIN PHOSPHATASE 2C 60 ISOFORM X1-RELATED 72 176 - -
Mtr4g0489 178 PANTHER PROTEIN PHOSPHATASE 2C 60 ISOFORM X1-RELATED 50 72 - -
Mtr4g0489 178 PANTHER PROTEIN PHOSPHATASE 2C 72 176 IPR015655 GO:0004722|GO:0006470
Mtr4g0489 178 PANTHER PROTEIN PHOSPHATASE 2C 50 72 IPR015655 GO:0004722|GO:0006470
Mtr4g0489 178 SUPERFAMILY PP2C-like 52 177 IPR036457 -
Mtr4g0489 178 Pfam Protein phosphatase 2C 55 177 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0489 Mtr-Chr4 6095055 6095779 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g0489 51 177 PP2C-type Phosphatase Gene Family AT4G31860 65.563 2.02e-66 203
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0489 K17499 - mtr:MTR_3g451410 366.311