Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0483 ATGTCCCTTCCAACAGCATATCAAGAGCACCTTCCTTCATCACCACAATGGCTAAACAAAGGAGACAACTCATGGCAAATGACAGCATCAACCCTAGTTGGTCTACAAAGCATGCCAGGTCTTGTAATTCTCTATGCAAGTATGGTCAAAAAGAAATGGGCTATGAATTCAGCTTTCATGGCACTTTATGCTTATGCATCAGTGCTAATATGTTGGGTTCTTTTATGTTACCGTATGGCTTTTGGTGATGAACTTTTTCCATTTTGGGGTAAAGGTGCACCTTCATTAGGTCAAAAATTTCTTACACATCAAGCAAAAGTACCTGAAAGTACTCATTTCTTTAAGAATGGTACTGAAGAAGCTTCAACAACACAACCACTTTTTCCTATGGCTTCACTTGTTTATTTTCAATTCAATTTTGCTGCTATTACTGTTATTTTGTTAGCTGGATCTGTTCTTGGAAGAATGAACATTAGGGCTTGGATGGCTTTTGTACCTCTTTGGCTCATTTTCTCTTACACTGTTGGTGCTTTTAGTATATGGGGTGGTGGATTTTTGTATCATTGGGGTGTCATTGATTTCTCTGGTGGCTATGTTATTCATCTTTCTTCTGGAATTGGTGGATTCACTGCAGCTTATTGGGTTGGGCCAAGGTTGAAGAGTGATAGGGAGAGATTCCCACCAAACAATGTATTGCTTATGCTAGCAGGAGCAGGATTGTTATGGATGGGTTGGTCAGGGTTCAATGGTGGAGCACCATATGCAGCAAACATTGACTCTTCTATTGCTGTACTCAACACTAACATATGTGCTGCAACTAGTCTTCTTGTGTGGACCACTTTGGATGTTGCTTTCTTTGGTAAACCTTCAGTGATTGGTGCTGTTCAGGGTATGATGACAGGACTTGTTTGCATTACTCCAGGAGCAGGACTTGTGCAGTCATGGGCAGCTATAGTGATGGGAATACTATCTGGGAGTATTCCATGGTGGACTATGATGGTCCTCCACAAGAAGTCAACTCTTCTACAAAAGGTAGATGACACCCTTGGAGTGTTTCACACACATGCTGTGGCCGGCCTTTTAGGAGGCCTCCTCACAGGTCTCTTAGCAGAACCAGATCTTTGCAGACTCATATTGCCGGTGACTAACTCAAGGGGTGCCTTCTATGGGGGCGGTGGCGGCATTCAGTTCTTGAAGCAATTAGTGGCAGCACTTTTCATCACTGGATGGAACTTAGTCTCCACCACACTAATTCTTCTCACCATACAATTGTTCATACCGTTGAGGATGTCGAACGACCAGCTCGAGACTGGTGATGATGCTGTCCACGGCGAGGAAGCTTATGCACTTTGGGGTGATGGAGAAAAGTATGACCCAACTAAGCATGGATCCTCATCAAAAGCAGATGAAATTGAAGTATCACCATATGTTACTGGGGCAAGAGGTGTAACCATAAATTTATGA 1464 0.4296 MSLPTAYQEHLPSSPQWLNKGDNSWQMTASTLVGLQSMPGLVILYASMVKKKWAMNSAFMALYAYASVLICWVLLCYRMAFGDELFPFWGKGAPSLGQKFLTHQAKVPESTHFFKNGTEEASTTQPLFPMASLVYFQFNFAAITVILLAGSVLGRMNIRAWMAFVPLWLIFSYTVGAFSIWGGGFLYHWGVIDFSGGYVIHLSSGIGGFTAAYWVGPRLKSDRERFPPNNVLLMLAGAGLLWMGWSGFNGGAPYAANIDSSIAVLNTNICAATSLLVWTTLDVAFFGKPSVIGAVQGMMTGLVCITPGAGLVQSWAAIVMGILSGSIPWWTMMVLHKKSTLLQKVDDTLGVFHTHAVAGLLGGLLTGLLAEPDLCRLILPVTNSRGAFYGGGGGIQFLKQLVAALFITGWNLVSTTLILLTIQLFIPLRMSNDQLETGDDAVHGEEAYALWGDGEKYDPTKHGSSSKADEIEVSPYVTGARGVTINL* 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0483 487 PRINTS Rhesus blood group protein signature 137 153 IPR002229 GO:0005887
Mtr4g0483 487 PRINTS Rhesus blood group protein signature 232 250 IPR002229 GO:0005887
Mtr4g0483 487 PRINTS Rhesus blood group protein signature 263 285 IPR002229 GO:0005887
Mtr4g0483 487 PRINTS Rhesus blood group protein signature 318 336 IPR002229 GO:0005887
Mtr4g0483 487 PRINTS Rhesus blood group protein signature 356 372 IPR002229 GO:0005887
Mtr4g0483 487 TIGRFAM amt: ammonium transporter 22 448 IPR001905 GO:0008519|GO:0016020|GO:0072488
Mtr4g0483 487 ProSitePatterns Ammonium transporters signature. 193 218 IPR018047 GO:0008519|GO:0016020|GO:0072488
Mtr4g0483 487 Gene3D Ammonium transporter AmtB like domains 3 451 IPR029020 -
Mtr4g0483 487 PANTHER AMMONIUM TRANSPORTER MEP2 1 484 IPR001905 GO:0008519|GO:0016020|GO:0072488
Mtr4g0483 487 PANTHER AMMONIUM TRANSPORTER 1 484 - -
Mtr4g0483 487 Pfam Ammonium Transporter Family 25 448 IPR024041 GO:0008519|GO:0016020|GO:0072488
Mtr4g0483 487 SUPERFAMILY Ammonium transporter 17 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0483 Mtr-Chr4 5934319 5938372 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g0483 130 487 Inorganic Solute Cotransporters AT2G38290 76.323 0.0 546
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0483 K03320 - gmx:100798599 854.358
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g0483 4 5934319 5938372 Mtr4g0483 4 5934319 5938372 ECH