Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0435 ATGGATTCTCATCATCATGATTATGAGTTTGAAGCATGTTTCTTAGAGAATGGAGGAAACATTAAAGGAATTGTGAGCAAAGAAACTATGAAACATGGTAGAACAGCACATAACATGTCATCATCTTCATTGCGTAAGAAATCTGACCTAACTCTTGTCTCCAAAGTTCGCTATGGATTCCTTAGAAAAGTTTTGGCCAATTTCCAAGAGGTTATTCTTGGAACAAAACTTTCAATTCTGTTTCCAACCATTCCTTTTGCTATTATAGCTCAATGCTATGGATTTTCAAGACCTTGGGTTTTTGCATGGAGCTTACTTGGTCTTATCCCTCTGGCTGAACGAGTCAGTTTCTTAACAGAACAGATATCTTACTACACAGGTCCCACAGTGGGAGGACTTTTGAATGCAACATGTGGGAATGCTACAGAACTCATCATTGCAATATTTGCACTTAGCAATAACAAAATTGATGTGGTCAAGTATTCTCTCCTTGGTTCCATACTCTCCAACCTTCTTCTTGTTCTTGGAACCTCTCTATTATGTGGTGGCATTGCAAACCTAAGAGCAGAACAAAAATATGACAGAAGACAGGCAGATATAAATTTGCTTATGCTTCTTGTGGCATTGTCTTGTCACTTAGTGCCATTGCTGTTCCAATATGGTGACGCTTCATTGGCTGTCAATGCAAACTCATCTCTGCAGTTTTCGCGAGCCGCTAGCATTGTGATGGTGATTGCATATTTTGCATACCTTTTCTTCCAACTATGGACTCACCGACAATTATTTGAAGCACAAGATGAAGATGATGAAGATTGTGAAAATGCTTCAGAAGAAGCAGTTATAGGATTTTGGAGTGGATTTGCTTGGCTTGTTATTATGACTGTGTTCATTGCTATTTTGTCTGAATATGTGGTTGACACTATTCAGGATGCATCAGATTCATGGGGTCTATCTGTCAGCTTCCTCAGCATAATCATGCTACCTATAGTTGGCAATGCAGCTGAACATGCAGGAGCAATCATATTTGCTTTCAAGAACAAACTGGATATATCTTTGGGTGTTGCTTTAGGTTCTGCAACTCAAATTGGAATGTTTGTGGTTCCCTTATGTGTGATTGTTGCTTGGATTCTTGGTATCAAAATGGACCTCAATTTCAACCTCCTAGAAACAGGTTCTCTTGCTTTGGCAATAATAACCACAGGCTTCACATTACAGGATGGAACTTCTCACTACTTGAAAGGCATTATTCTCTTGCTCTTGTACATTGTTATTGGTGCCTGCTTTTTTGTACAAAAAACAGCCTCCGACCATGCTGATATTGCTAACATAATGCTTCTTCATTCACCAACTGATGCCAAATTTAGAGCTTAA 1371 0.3895 MDSHHHDYEFEACFLENGGNIKGIVSKETMKHGRTAHNMSSSSLRKKSDLTLVSKVRYGFLRKVLANFQEVILGTKLSILFPTIPFAIIAQCYGFSRPWVFAWSLLGLIPLAERVSFLTEQISYYTGPTVGGLLNATCGNATELIIAIFALSNNKIDVVKYSLLGSILSNLLLVLGTSLLCGGIANLRAEQKYDRRQADINLLMLLVALSCHLVPLLFQYGDASLAVNANSSLQFSRAASIVMVIAYFAYLFFQLWTHRQLFEAQDEDDEDCENASEEAVIGFWSGFAWLVIMTVFIAILSEYVVDTIQDASDSWGLSVSFLSIIMLPIVGNAAEHAGAIIFAFKNKLDISLGVALGSATQIGMFVVPLCVIVAWILGIKMDLNFNLLETGSLALAIITTGFTLQDGTSHYLKGIILLLLYIVIGACFFVQKTASDHADIANIMLLHSPTDAKFRA* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0435 456 Pfam Sodium/calcium exchanger protein 286 424 IPR004837 GO:0016021|GO:0055085
Mtr4g0435 456 Pfam Sodium/calcium exchanger protein 98 256 IPR004837 GO:0016021|GO:0055085
Mtr4g0435 456 PANTHER VACUOLAR CATION/PROTON EXCHANGER 3 11 440 - -
Mtr4g0435 456 TIGRFAM caca2: calcium/proton exchanger 63 429 - -
Mtr4g0435 456 TIGRFAM cax: calcium/proton exchanger 83 429 IPR004798 GO:0006816|GO:0015369
Mtr4g0435 456 Gene3D - 272 429 IPR044880 -
Mtr4g0435 456 Gene3D - 128 268 IPR044880 -
Mtr4g0435 456 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 11 440 IPR004713 GO:0006812|GO:0008324|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0435 Mtr-Chr4 5410242 5415180 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g0435 16 432 Antiporters AT2G38170 70.142 0.0 573
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0435 K07300 - gmx:100782052 643.654
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g1640 7 31822602 31826741 Mtr4g0435 4 5410242 5415180 PCT