Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0434 ATGGGTATTTCCAGGGTTTCAAAGAACAAGACATGCAGGAAGAAAAGAAAGTATGAACTCGGTCGCCAGCCGGCTAACACCAAGCTATCAAGCAACAAAACACTTAGGACGATTCGTGTTAGAGGTGGCAATGTGAAATGCAGAGCTTTGAGATTGGATACTGGAAACTGTTCATGGGGGAGTGAAGCTGTCACTCGAAAAACCCGTTTGCTAAATGTGGTTTACAATGCTTCCAACAATGAGCTTGTGCGAACTCAGACTCTTGTAAAGAGTGCTATTGTGCAGGTTGATGCCGCTCCATTCAAGCAGTGGTACCTTCAACACTATGGTGTTGAAATCGGTAGCGCAAAGAAAACTTCTGGCAAGAAAGACTCTGCAGAGGAAAGTGAGGCTGTTACAGAAGAAGTAAAAAAGAGCAACAATGTACAGAGAAAATTGGAGCAACGCCAGAAAGATCGTCGGCTGGATCCCCTTATTGAAGTGCAGTTTGGTGGTGGACGATTGCTTGCCTGCATTTCTTCTCGACCTGGTCAATGTGGCAGAGCTGACGGCTACATCCTGGAAGGTAAGGAGCTGGAATTTTACATGAAGAAACTGCAGAAGAAGAAGAACGGAAACGGTGCTGCTTGA 630 0.4556 MGISRVSKNKTCRKKRKYELGRQPANTKLSSNKTLRTIRVRGGNVKCRALRLDTGNCSWGSEAVTRKTRLLNVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVEIGSAKKTSGKKDSAEESEAVTEEVKKSNNVQRKLEQRQKDRRLDPLIEVQFGGGRLLACISSRPGQCGRADGYILEGKELEFYMKKLQKKKNGNGAA* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0434 209 PANTHER 40S RIBOSOMAL PROTEIN S8 7 205 IPR001047 GO:0003735|GO:0005840|GO:0006412
Mtr4g0434 209 TIGRFAM eS8: ribosomal protein eS8 8 189 IPR001047 GO:0003735|GO:0005840|GO:0006412
Mtr4g0434 209 PANTHER RIBOSOMAL PROTEIN S8E FAMILY PROTEIN 7 205 - -
Mtr4g0434 209 CDD Ribosomal_S8e_like 8 187 - -
Mtr4g0434 209 Pfam Ribosomal protein S8e 8 187 IPR022309 -
Mtr4g0434 209 MobiDBLite consensus disorder prediction 117 149 - -
Mtr4g0434 209 Gene3D - 23 153 - -
Mtr4g0434 209 Gene3D - 154 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0434 Mtr-Chr4 5390503 5393596 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g0434 1 209 Cytoplasmic Ribosomal Protein Gene Family AT5G59240 76.256 9.01e-105 299
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0434 K02995 - gmx:100500112 334.724