Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0433 ATGAGTTTGATGGCTATGCGGTCATCTTCCTCTTCTTTCTCCTACGGATTTACCTACGACGTCTTTCTTAGTTTTAGAGGCACCGACACTCGTTACGGTTTTACTGGAAATCTCTATGAAGCTCTACGTGTCAAGGGAATTCACACCTTCATTGATGACAGAGAGCTTCAGCGAGGAGACCAAATAACACCGTCACTTCTCAAGGCCATTCAAGAATCTAAGATTGTCATTATCGTTTTCTCTAACCACTATGCTTCTTCTTCGTTTTGTTTAGATGAACTTGTCCATATTATTCACTGCTCCAAGGAAAATGGTTGCCTGGTTTTGCCTATTTTCTATGGTGTGGAACCTTCTCATGTGCGATATCAGACTGGAAGTTATGGTGAAGCACTTGCTGAGCATGAAGAAGCTAGGAAGAAAGAAAAATACAAAGATAATATGGAGAAGTTGCAGAAATGGGAGATGGCTCTTAAGCAAGCAGCTAATTTGTCTGGCTACCATTTCAATGCTAGGACTGGATATGAATACGAGTTTATTCAGATGATAGTCACATATGTCTCCAACAAGATCAATCACACTCCTTTACATGTTGCTGATTACCCGGTTGGATTAGAGCCTCGTGTTCTGAAATTATATTCACTACTGGATATTGGTTCTAATGATAAAGTCCAAATGCTAGGGATCTATGGGACTGGAGGAATGGGTAAAACCACACTTGGAAAAGCAATTTACAATTTCATTGCTCATCAATTTGAATGTCTTTGTTTTCTTCCCAATGTGAGAGAAAATTCAACTAAAGTGGATGGTTTAGAGTATCTTCAGAGTAAGGTCCTTTTTAAAACAATTGGATTGGAAATTAGGTTTGGAGATATCAGTGAGGGAATTCCAATCATAAAGAAAAGGCTACAAAGAAAGAAAGTTCTTTTGATTCTCGATGATATTGACAAACTGAAACAACTACAGGTTTTGGCCGGAGAACCTGATTGGTTTGGTCTTGGCAGCAGAGTCATCATTACCACTCGAGACAAACACTTGCTAAAATGTCATGGGATTGATATAACATACGAAGTAGATGGTTTAAATGAGAACGAAGCTCTTCAATTATTAAGGTGGAAGGCTTTTAAAAATAGTACTGTTAATCCAAGTTATGAAGGAATTTTAAACCGTGTGGTAACTTATGCTTCTGGCCTTCCATTGGCTTTAGAAGTTGTGGGTTCCAATTTGTTTGGAAAGGATATAGAAAAATGGAAATCTTTACTAGATGAGTATGAAAGGATTCCTAATAAAGAAATCCAAAAGATACTTATAGTGAGCTTTAATAATTTAGGTGAATATGAGCAGAGTGTTTTCCTCGACATTGCTTGTTGTTTCAAAGGATATAGCTTGGATGAGGTCGAATATATACTTTGTGCTCATTATGGTTATTGCATGAAATATCATATAGGAAAGTTGGTTGATAAATCTCTCATAAAGATTCAGTTGAGTCGTGTGACATTACATGACCTGATAGAAATCATGGGTAAAGAAATTGTTCGAAAAGAATCGGTCATTGAGCCTGGGAAGCGTACCAGACTATGGTTCTGTGAAGATATAGTTCGTGTTTTAAAAGAAAATACGGGGACAGGTAATACTGAAATCATACATCTTGACTTCTCCTCGATTAAAGAAGTTGTAGATTGGAATGGAAAGGCCTTCAAGAAAATGAAAATTCTCAAAACACTTGTCATTAAAAGTGGTCATTTTTCCAAAGCTCCTGTATATTTTCCAAGTACTTTGAGAGTATTAGAATGGCAAAGATATCCTTCACAATGTTTGCCATCAAGCATTTTCAACAAGAAGTTCGAGAATCTGAAAATTTTGAAATTTGACTATTGTGAATATTTAATTGATACTCCAGACGTCTCATGTCTCCCAAATTTAGAAAAAATTTCATTTCAATCATGTAAGAATTTAGTTACAATTCACAATTCAACCGGGTTCTTAAATAAACTTAAATTCTTGAGTGTTGAAGGATGCTGCAAGCTTAGGTATTTTCCACCTTTGGAGCTGATTTCTCTTGAAAATCTGCAAATTTCACGTTGCAAGAGTCTGCAGAGTTTTCCAAAAATATTGGGCAAGATTGAAAATTTAAAATACCTTTCAATTTATGGAACTTCCATAAAAGGCTTTCCAGTTTCATTTCAAAATCTCACTGGACTTTGTAATATATCTATAGAGGGACATGGAATGTTTAGGTTACCAAGTTTCATTCTCAAGATGCCAAAGTTGTCGAGTATTTCTGTCAATGGCTATAGTCATTTATTGCCAAAAAAAAATGATAAACTAAGTTTTCTGGTGTCTTCAACTGTGAAATATCTTGATCTCATAAGAAACAACCTCTCAGATGAATGTCTTCCGATTCTTCTGAGATTGTTTGCTAATGTGACTTATCTATACTTATCGGGTAACAATTTCAAAATTCTTCCAGAATGCCTCAAAGAATGTCGCTTTCTATGGAGCCTTCAATTGAATGAATGCAAGTCTCTTCAAGAAATTAGAGGGATTCCTCCAACTCTAAAGAACATGTCTGCATTACGCTGCGGGTCATTAAATTCCTCAAGCAGAAGCATGCTAGTGAATCAGCAATTGCACGAAGGCGGAGAAACCAAGTTTTGTTTTCCATCATCAAGAACAGAGACGATCCCGAAGTGGTTTGAACATCAAAGCAAACAACCGACAATTTCTTTCTGGTATCGGAACAACTTCCCTTCCATAGCTCTATTCTTTTCTACTAAATGGATGCATAACAAAGACTCCAATAGTATAGATACTAAATTCAGAGGCAATCTTTTTATAAATGGCCATACATGTACTTTTGTGGGGAATGGGAATCCTTTTGATCCTTCTATAAAAAAAAAGAGAATCACTTTAATCCAGGGATAG 2922 0.3624 MSLMAMRSSSSSFSYGFTYDVFLSFRGTDTRYGFTGNLYEALRVKGIHTFIDDRELQRGDQITPSLLKAIQESKIVIIVFSNHYASSSFCLDELVHIIHCSKENGCLVLPIFYGVEPSHVRYQTGSYGEALAEHEEARKKEKYKDNMEKLQKWEMALKQAANLSGYHFNARTGYEYEFIQMIVTYVSNKINHTPLHVADYPVGLEPRVLKLYSLLDIGSNDKVQMLGIYGTGGMGKTTLGKAIYNFIAHQFECLCFLPNVRENSTKVDGLEYLQSKVLFKTIGLEIRFGDISEGIPIIKKRLQRKKVLLILDDIDKLKQLQVLAGEPDWFGLGSRVIITTRDKHLLKCHGIDITYEVDGLNENEALQLLRWKAFKNSTVNPSYEGILNRVVTYASGLPLALEVVGSNLFGKDIEKWKSLLDEYERIPNKEIQKILIVSFNNLGEYEQSVFLDIACCFKGYSLDEVEYILCAHYGYCMKYHIGKLVDKSLIKIQLSRVTLHDLIEIMGKEIVRKESVIEPGKRTRLWFCEDIVRVLKENTGTGNTEIIHLDFSSIKEVVDWNGKAFKKMKILKTLVIKSGHFSKAPVYFPSTLRVLEWQRYPSQCLPSSIFNKKFENLKILKFDYCEYLIDTPDVSCLPNLEKISFQSCKNLVTIHNSTGFLNKLKFLSVEGCCKLRYFPPLELISLENLQISRCKSLQSFPKILGKIENLKYLSIYGTSIKGFPVSFQNLTGLCNISIEGHGMFRLPSFILKMPKLSSISVNGYSHLLPKKNDKLSFLVSSTVKYLDLIRNNLSDECLPILLRLFANVTYLYLSGNNFKILPECLKECRFLWSLQLNECKSLQEIRGIPPTLKNMSALRCGSLNSSSRSMLVNQQLHEGGETKFCFPSSRTETIPKWFEHQSKQPTISFWYRNNFPSIALFFSTKWMHNKDSNSIDTKFRGNLFINGHTCTFVGNGNPFDPSIKKKRITLIQG* 974
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0433 973 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 29 918 IPR044974 GO:0006952
Mtr4g0433 973 SUPERFAMILY Toll/Interleukin receptor TIR domain 8 166 IPR035897 -
Mtr4g0433 973 Gene3D Ribonuclease Inhibitor 522 699 IPR032675 -
Mtr4g0433 973 Gene3D - 13 190 IPR035897 -
Mtr4g0433 973 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 186 453 IPR027417 -
Mtr4g0433 973 Pfam NB-ARC domain 220 439 IPR002182 GO:0043531
Mtr4g0433 973 Gene3D - 359 443 IPR042197 -
Mtr4g0433 973 PRINTS Disease resistance protein signature 225 240 - -
Mtr4g0433 973 PRINTS Disease resistance protein signature 301 315 - -
Mtr4g0433 973 PRINTS Disease resistance protein signature 394 408 - -
Mtr4g0433 973 PRINTS Disease resistance protein signature 681 697 - -
Mtr4g0433 973 CDD AAA 228 342 - -
Mtr4g0433 973 SMART till_3 18 163 IPR000157 GO:0007165
Mtr4g0433 973 ProSiteProfiles TIR domain profile. 17 190 IPR000157 GO:0007165
Mtr4g0433 973 PANTHER ARCHAEAL ATPASE 29 918 - -
Mtr4g0433 973 Gene3D Ribonuclease Inhibitor 700 903 IPR032675 -
Mtr4g0433 973 SUPERFAMILY L domain-like 538 864 - -
Mtr4g0433 973 Gene3D - 191 352 IPR027417 -
Mtr4g0433 973 SUPERFAMILY "Winged helix" DNA-binding domain 429 536 IPR036390 -
Mtr4g0433 973 Pfam TIR domain 19 194 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0433 Mtr-Chr4 5370017 5374094 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g0433 13 795 WRKY Transcription Factor Family AT4G12020 29.152 3.54e-74 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0433 - - cam:101500791 1179.08