Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0416 ATGGAAGGGCATCAATTCCATCACAAGAACCAAAGACAACATCAACAACAACAACAAAATCTTCATCTTCATAATATAAATAACACAATTAACGTTGTTGATGTTTCTGATAGGTTTCCTCAATGGAGCATACAAGAGACGAACGAGTTTCTGCTGATTCGAGCGGAGCTTGATCAAACTTTCATGGAGACTAAAAGAAACAAACAGTTGTGGGAAGTTATTTCCAACCATATGAAGGAAAAGGGTTATCATAGAAGTGCAGAACAGTGTAAGTGCAAGTGGAAAAACCTTGTTACTCGCTATAAGGGATGTGAAACAATGGAGACAGAAGTGTTGAAACAACAATTTCCATTTTACAATGAACTTCAAACAATTTTCACAGCAAGGATGCAGAGAATGTTATGGACTGAAGCTGAAGACGGATCGAAGAAGAAGGCTACACACCTTTCAACCGATGACGATGAAGACGATGGTAATGAAGAAAGTGAAGCAGTGTCTCAAAAGGGTAGCAATAGAAAGAAGAAGAAAGCAAAGGTAGAAAACGAAAGCGGTAGTAGCAAAAGTTTCTTCCGCAATTTGAAGGAAATTTTGGATGAGTTCATGAGACAACAATTGCAAATTGAAGCACAATGGATGGAAGCATTTGAAGCTAGAGAGAATGAAAGGAGGTTGAGGGAGATGGAGTGGAGACAACAAATGGAAATGCTTGAGAATGAGAGGATATTGATGGAACAAAGATGGAGAGAAAGGGAAGAACAAAGGAGGATTAGAGAAGAAGCTAGGGCTGAGAAGAGAGATGCTTTGATCACAGCTCTATTAAACAAGTTAGAGAGACAATAG 840 0.3881 MEGHQFHHKNQRQHQQQQQNLHLHNINNTINVVDVSDRFPQWSIQETNEFLLIRAELDQTFMETKRNKQLWEVISNHMKEKGYHRSAEQCKCKWKNLVTRYKGCETMETEVLKQQFPFYNELQTIFTARMQRMLWTEAEDGSKKKATHLSTDDDEDDGNEESEAVSQKGSNRKKKKAKVENESGSSKSFFRNLKEILDEFMRQQLQIEAQWMEAFEARENERRLREMEWRQQMEMLENERILMEQRWREREEQRRIREEARAEKRDALITALLNKLERQ* 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0416 279 Gene3D - 42 103 - -
Mtr4g0416 279 ProSiteProfiles Myb-like domain profile. 42 98 IPR001005 -
Mtr4g0416 279 PANTHER TRANSCRIPTION FACTOR MYB FAMILY-RELATED 1 279 - -
Mtr4g0416 279 Coils Coil 226 246 - -
Mtr4g0416 279 CDD GT1 40 105 - -
Mtr4g0416 279 PANTHER - 1 279 - -
Mtr4g0416 279 Pfam Myb/SANT-like DNA-binding domain 41 124 IPR044822 -
Mtr4g0416 279 MobiDBLite consensus disorder prediction 162 181 - -
Mtr4g0416 279 MobiDBLite consensus disorder prediction 139 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0416 Mtr-Chr4 4991169 4993450 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g0416 22 278 Trihelix Transcription Factor Family AT2G38250 55.431 7.89e-74 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Mtr4g0416 Myb_DNA-bind_4 4.1e-19 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g0416 4 4991169 4993450 Mtr4g0416 4 4991169 4993450 ECH