Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0410 ATGGCCGCCGCAACCGCCACCGCTGCAGCCACTTCTTCCTTCATCGGCACCCGCCTCCGCGAAGTTCAATCCAACTCGGGTAGGATCCAAGCCCGATTTGGCTTCGGAAAGAAGAAAGCCGCACCAAAGAAACCATCCAGATCAAGTCCAAGTACTGATCGTCCATTATGGTTCCCCGGAGCAAAGTCACCGGAGTGGCTAGACGGAAGTTTGGTCGGAGATTACGGATTTGATCCATTTGGTTTGGGGAAACCAGCAGAATATTTGCAATTTGATCTCGACTCGCTTGATCAGAATTTGGCAAAGAATCTTGCTGGAGATGTGATCGGAACCAGGACGGAGTTTGCTGATGTGAAATCGACTCCATTTCAGCCTTACAGTGAGGTTTTTGGACTTCAAAGGTTTAGAGAATGTGAGTTGATTCATGGTAGGTGGGCTATGCTTGCTACTCTTGGTGCTCTTACTGTTGAGTGGCTTACTGGTGTTACATGGCAAGATGCTGGAAAGGTTGAGCTAGTAGAAGGATCAACATATCTTGGACAACCACTTCCATTCTCAATCACAACACTAATCTGGATCGAAGTTCTAGTAATTGGCTACATTGAATTCCAGAGAAATGCTGAGCTTGATTCAGAAAAGAGACTATACCCAGGTGGAAAATTCTTTGACCCACTTGGTTTAGCATCTGATCCAGAAAAGAAAGCAACACTTCAATTGGCAGAAATCAAACATGCTCGTCTTGCTATGGTTGCTTTCCTTGGTTTTGCTGTTCAAGCTGCAGCTACTGGTAAAGGACCACTTAACAACTGGGCTACTCATTTGAGTGATCCTCTTCACACTACCATCATTGATACCTTTTCTTCCTCTTAG 870 0.4563 MAAATATAAATSSFIGTRLREVQSNSGRIQARFGFGKKKAAPKKPSRSSPSTDRPLWFPGAKSPEWLDGSLVGDYGFDPFGLGKPAEYLQFDLDSLDQNLAKNLAGDVIGTRTEFADVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSTYLGQPLPFSITTLIWIEVLVIGYIEFQRNAELDSEKRLYPGGKFFDPLGLASDPEKKATLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFSSS* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0410 289 PANTHER CHLOROPHYLL A-B BINDING PROTEIN CP29.2, CHLOROPLASTIC 3 289 - -
Mtr4g0410 289 SUPERFAMILY Chlorophyll a-b binding protein 48 287 - -
Mtr4g0410 289 MobiDBLite consensus disorder prediction 22 57 - -
Mtr4g0410 289 Pfam Chlorophyll A-B binding protein 64 259 IPR022796 -
Mtr4g0410 289 Gene3D Chlorophyll a/b binding protein domain 57 289 - -
Mtr4g0410 289 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 3 289 IPR001344 GO:0009765|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0410 Mtr-Chr4 4938049 4940614 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g0410 14 289 Chloroplast and Mitochondria Gene Families AT3G08940 87.726 7.14e-180 495
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0410 K08915 - rcu:8267514 499.204
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g0410 4 4938049 4940614 Mtr4g0410 4 4938049 4940614 ECH