Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0398 ATGCCTTCTTCTTCCACAACCATAGTGTCAAAATGCACAATCTATCCACACCAAAAATCCTCATTAAAACCCTTAAAACTCTCTGTCTCCGACCTCCCAATGCTCTCATGTCACTACATCCAAAAAGGAATTTTACTTTCCACACCCCCTTATTCCTTTGAAGAACTAATTCACACCCTCAAAAACTCCCTCTCCATCGCTCTCTCCCACTTCCCACCTCTCGCCGGTAGACTCACCACCGACTCCGACGGTTACATTTACATAACCTCCAACGACGCCGGCGTCGATTTCATCCACTCCAAAGCCAAACACCTTACTCTCAACACCATCCTCTCACCTTCTCTCATCGATGTTCATCCTTGTTTCAAGGAGTTGTTCTTCGCTTACGACATGCCGATTTCTTACTCTGGTCATCAAATCCCCCTCGCCGCCGTTCAAGTCACCGAACTCGCCGACGGTGTTTTCATCGGATTTACTGTTAATCATTCCGTTACTGACGGTACTTCCTTCTGGCACTTCTTCAACACTTTCGCCGCCATCACTAAATCCACCGGTGTCGGCGCCGCTGTCAAGATCTCAAAATCACCAGATTTTACTCGTGACACAATCTTCAACTCCACCGCTGTTCTTCCAATCCCCGCCGGTGGTCCTACCGTTACTTTCGACGTCGATGAGCCTCTCCGTGAACGTATCTTCCATTTCTCTCGTGAATCCATTCTCAAACTCAAACACAAAACAAACGGTAACAGTAATGGAATCAGTAACAGTAACGGTAACGGAATCAGTTACAACGGTTTAGCAGATCCAACTGAAATAATAAGTAAAGAGTCAAACGACGGTTGGAAAATCGTTAACTCTAACGGTCATGTTAACGGAAACGGAACTGTTAAAAGTAACGTGCGAAACGAGATCTCATCGTTTCAATCGTTAAGTGCACAGTTATGGCGTTCGGTGACACGTGCGAGAAAATTGGAACTAACAAAAACGTCGACGTTTCGTATGGCGGTGAATTGTCGTCACAGATTAAACCCAAAAATGGAACCGTTTTATTTCGGTAACGCAATACAAAGCATCCCAACCGTTGCTTCAGTGAACGATATATTATCCAACGATCTAAAATTCCTAGCTGGATTACTTCATCAAAACGTCGTCGCACATGATGATGTTACGGTGCGCCGCGGAGTAGAGGATTGGGAAAATAATCCTAGGTTATTTCCTCTTGGGAATTTTGATGGTGCTATGATAACTATGGGTAGTTCACCACGTTTTCCTATGTATGATAATGATTTTGGGTGGGGTATACCTTTGGCTATAAGGAGTGGTAAAAGTAATAAATTTGATGGTAAAATTTCAGCTTTTCCTGGTAGAGAAGGAAATGGGAGTGTTGATCTTGAAGTTGTTTTGAAACCTGAGACTATGTTTGGACTTGAAAATGATGTGGAATTTATGCAGTATGTTACGGATGTAGTGTGA 1473 0.4358 MPSSSTTIVSKCTIYPHQKSSLKPLKLSVSDLPMLSCHYIQKGILLSTPPYSFEELIHTLKNSLSIALSHFPPLAGRLTTDSDGYIYITSNDAGVDFIHSKAKHLTLNTILSPSLIDVHPCFKELFFAYDMPISYSGHQIPLAAVQVTELADGVFIGFTVNHSVTDGTSFWHFFNTFAAITKSTGVGAAVKISKSPDFTRDTIFNSTAVLPIPAGGPTVTFDVDEPLRERIFHFSRESILKLKHKTNGNSNGISNSNGNGISYNGLADPTEIISKESNDGWKIVNSNGHVNGNGTVKSNVRNEISSFQSLSAQLWRSVTRARKLELTKTSTFRMAVNCRHRLNPKMEPFYFGNAIQSIPTVASVNDILSNDLKFLAGLLHQNVVAHDDVTVRRGVEDWENNPRLFPLGNFDGAMITMGSSPRFPMYDNDFGWGIPLAIRSGKSNKFDGKISAFPGREGNGSVDLEVVLKPETMFGLENDVEFMQYVTDVV* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0398 490 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 5 487 - -
Mtr4g0398 490 Pfam Transferase family 6 483 - -
Mtr4g0398 490 Gene3D - 6 211 IPR023213 -
Mtr4g0398 490 PANTHER ANTHOCYANIN 5-AROMATIC ACYLTRANSFERASE 5 487 - -
Mtr4g0398 490 Gene3D - 225 482 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0398 Mtr-Chr4 4672754 4674518 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g0398 58 473 Monolignol Biosynthesis Gene Families AT5G48930 27.083 8.85e-34 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0398 - - cam:101493121 783.482
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g0398 4 4672754 4674518 Mtr4g0398 4 4672754 4674518 ECH