Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0395 ATGTCTTCCCCAAGATCACTTTCCTCTTCCGATTTTTCCGATTTTTCCGATGACATCATTTCCAGTAGAACAAGAAAGTACGATGTGTTTTTGAGTTTTAGAGGAGAAGACACTAGAGCATCATTCACTTCACATCTTACTTTCTCTCTTCAAAACGCCGGAATTATTGTCTTCAAGGACGATCAGTCGCTTGAAAGAGGAGAGCACATATCCACATCGTTACTCCAAGCAATCGAAATCTCTAGAATTGCTGTTATCGTCTTCTCCAAAAACTATGCTGATTCGTCATGGTGTCTGCGAGAGTTGGTTCAAATAATGTCGTGTTACAGTACTATAGGCCAAGTGGTACTGCCAGTGTTCTATGATGTTGACCCTTCCGAAGTTCGTCGTCAAACCGGTGACTTTGGTAAATCATTTCAAAATCTTTTGAACAGAATTTCTCAAGAGGAAGAGAGGAGGGTGCTAAAGTGGAACGATGGTTCTTTACAAAGAGATGACTTTCCTTTTTCAAACAAAGATATGGTGCGAAAATGGATAGATGCCCTTCATACAGCGGCTGGACTTGCTGGATTTGTTGTCCTAAATTCCAGGAATGAAAGTGAGGTTATCAGGGATATTGTTGAAAATGTTACTCGTTTGCTTGACAAGACAGACTTGTTCATTGCTGATAATCCAGTAGGAGTCGATTCTCGAGTGCAAGATATGATTCAACTCCTAGAAACTCAACAATCAAACGATGCTCTACTACTAGGGATGTGGGGGATGGGTGGAATCGGAAAAACCACCATTGCAAAATCCATTTACAATAAAATTGGTCGCAATTTTGAAGGTAGGAGCTTTCTTGAAAATATTAGGGAGGTTTGGGAGCAAGCCTCTGGACAATTGTATTTACAAGAACGACTTATGAATGATATTTTGAAAGACACCACAACCAAGATACAAAGCATTGAATCAGGAAAATCTATATTAAAGGAAAGACTGTGTCATAAAAGAGTACTTATTGTACTTGACGATGTCAATAAATTGGACCAACTAAATGCTTTGTGTGGAAGTTGTAAATGGTTTGCTCCAGGAAGTAGAATTATCATCACAACTAGGGATAAGCATATACTTAGAGGGAAACAAGTTGATAAAATATACATAATGAAAGAAATGGATGAAAGTGAATCTCTTGAGCTTTTTAGTTGGCACGCGTTCAAGCAAACAAGGCCTAGAGAAGATTTTTCTGAAATTTCCAAAAATGTAGTTAAGTATTCTGCGGGATTGCCACTAGCTCTTGAAGTCCTTGGGTCTTATTTGTTTGATAGGGAGATTTTAGAGTGGAGATCTGTATTGGATAAACTAAAAAGAATTCCCAATGATCAAGTGCATAAGAAGTTAAAAATAAGTTATGATGGTTTAAATGATGATACACAGAAAGAAATATTCCTTGACATATCTTGTTTCTTTATTGGAATGGACCGGAATGATGTTATTCGTATATTAGATGGCTGTGGATTTTTTGCAGGAATTGGAATAAGTGTCCTTGTTGAGAGAAGCCTTGTAACGGTTGATGATAAGAACAAGCTTGGCATGCATGATTTGCTCCGAGATATGGGAAGAGAAATCATTCGTGAGAAATCACCAAAGGAGCCTGAGGAACATAGTAGGCTGTGGTTTCATGAGGATGTGATTGATGTCTTGTTAGAACATACCGGAACTAAAGCTGTTGAGGGGCTGAGTTTGAAGCTGCCAGGTCGTAGTGCACAACGTTTTAGCACCAAAACATTTGAGAACATGAAGAAACTCAGATTGCTGCAACTTTCCGGTGTACAACTTGATGGAGATTTTAAACATCTTTCAAGAAAATTGAGATGGCTGCAGTGGAATGGATTTCCTTTAACATGCATACCGTCAAACTTCTATCAAAGAAATTTAGTTTCCATTGTGTTAGAAAACAGCAATATCAGACTTGTGTGGAAAGAGATGCAGGGGATGGAGCAGCTGAAAATTCTCAATCTTAGTCATTCTCAATATCTGACACAGACGCCTGACTTTTCATACTTGCCTAATCTTGAAAAGCTAGTACTTAAAGATTGTCCAAGGCTGTCTGAGATTTCCCAAAGTATTGGACATCTCAAGAAAATTCTTTTGATAAATTTGAAAGATTGCATTAGCCTTTGTAACCTTCCAAGAAACATCTATACGTTGAAATCTCTGAAAACTCTCATTCTATCTGGATGTTCAATGATTGACACGTTGGAAGAGGACTTGGAACAAATGGAATCTTTAACCACTCTGATTGCAAATAACACTGGTATAACAAAAGTACCCTTTTCAATTGTAAGATCAAAACGCATTGGATTTATTTCTTTGTGTGGATATGAAGGATTCTCACGTGATGTGTTTCCTTCTATCATTTCGTCTTGGATGTCACCAACAAATGGTCTCTCGCCCACTTTTCAAACAACTGCTGGGATGTCATCCCTTGTTTTTTTAAATGCAACAAATAGTATTTCCCATGATATATCATCTATTTCTTATGTCCTTCCGAAGCTTCAAAGCCTTTGGCTGGAATGTGGATCAGAACTTCAACTTTCACAGGACACAGCAATAATTTTGAATGCTTTAAGTGCAACAAATTCCAAGGAATTGGAATCAACTGCAACTACATCACAAGTATCAGAGGTGAAGACTTCTTCATTAATTGAATGTTGTGATCAAATGCCAGATTCAGCAACAAAAAATTACATGAAATCTCTTCTAATTCAGATGGGAACGAGTTGCCTAATCTCCAATATTCTCAAAGAGAGGATCTTACAGAATTTGACTGTCGATGGGCGTGGTAGTTTTTTGCTCCCTGGTGATGATTACCCAAATTGGTTAAGTTTCAACGCCAAAGGTTATTCTGTAATTTTTGAAGTCCCTCAAGTGGAAGGATGTAGCTTGAAGACAATAATGTGCATTGTCTATTCTTCAAGCCCATATGACATAACATCAGATGGCCTTAGAAATGTGTTGGTGATAAATCACACAAAGACCACCATTCAACTCTATAAGAGAGAGGCGTTATCGTCCTTCGAAAATGCGGACTGGCAGAGAGTGATATCAAATATGGAACCTGGTGACAAAGTGGAGATAGTTATTGTAATGGTGAACAATGTCATTGTGACGAAGACAGCAGTTTATCTCATATATGATGAACCAATTGACGGAAAAATGGACCACTGTGATTCCCAAGATACGAATGTTATTGTTGGTGGTGATGAAAATGAATGCTCTTCCAAGATTGTTTCTCCTCAAGTAGAGTCCACAGATGATTCTAATCAAAGACAAAAAAGAAGAAAACACTGGTGGAGATGA 3342 0.38 MSSPRSLSSSDFSDFSDDIISSRTRKYDVFLSFRGEDTRASFTSHLTFSLQNAGIIVFKDDQSLERGEHISTSLLQAIEISRIAVIVFSKNYADSSWCLRELVQIMSCYSTIGQVVLPVFYDVDPSEVRRQTGDFGKSFQNLLNRISQEEERRVLKWNDGSLQRDDFPFSNKDMVRKWIDALHTAAGLAGFVVLNSRNESEVIRDIVENVTRLLDKTDLFIADNPVGVDSRVQDMIQLLETQQSNDALLLGMWGMGGIGKTTIAKSIYNKIGRNFEGRSFLENIREVWEQASGQLYLQERLMNDILKDTTTKIQSIESGKSILKERLCHKRVLIVLDDVNKLDQLNALCGSCKWFAPGSRIIITTRDKHILRGKQVDKIYIMKEMDESESLELFSWHAFKQTRPREDFSEISKNVVKYSAGLPLALEVLGSYLFDREILEWRSVLDKLKRIPNDQVHKKLKISYDGLNDDTQKEIFLDISCFFIGMDRNDVIRILDGCGFFAGIGISVLVERSLVTVDDKNKLGMHDLLRDMGREIIREKSPKEPEEHSRLWFHEDVIDVLLEHTGTKAVEGLSLKLPGRSAQRFSTKTFENMKKLRLLQLSGVQLDGDFKHLSRKLRWLQWNGFPLTCIPSNFYQRNLVSIVLENSNIRLVWKEMQGMEQLKILNLSHSQYLTQTPDFSYLPNLEKLVLKDCPRLSEISQSIGHLKKILLINLKDCISLCNLPRNIYTLKSLKTLILSGCSMIDTLEEDLEQMESLTTLIANNTGITKVPFSIVRSKRIGFISLCGYEGFSRDVFPSIISSWMSPTNGLSPTFQTTAGMSSLVFLNATNSISHDISSISYVLPKLQSLWLECGSELQLSQDTAIILNALSATNSKELESTATTSQVSEVKTSSLIECCDQMPDSATKNYMKSLLIQMGTSCLISNILKERILQNLTVDGRGSFLLPGDDYPNWLSFNAKGYSVIFEVPQVEGCSLKTIMCIVYSSSPYDITSDGLRNVLVINHTKTTIQLYKREALSSFENADWQRVISNMEPGDKVEIVIVMVNNVIVTKTAVYLIYDEPIDGKMDHCDSQDTNVIVGGDENECSSKIVSPQVESTDDSNQRQKRRKHWWR* 1114
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0395 1113 Pfam NB-ARC domain 231 463 IPR002182 GO:0043531
Mtr4g0395 1113 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 33 1059 IPR044974 GO:0006952
Mtr4g0395 1113 Gene3D - 20 221 IPR035897 -
Mtr4g0395 1113 Gene3D Ribonuclease Inhibitor 564 915 IPR032675 -
Mtr4g0395 1113 SMART till_3 26 188 IPR000157 GO:0007165
Mtr4g0395 1113 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 214 479 IPR027417 -
Mtr4g0395 1113 Gene3D - 384 468 IPR042197 -
Mtr4g0395 1113 Pfam TIR domain 26 210 IPR000157 GO:0007165
Mtr4g0395 1113 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 33 1059 - -
Mtr4g0395 1113 SUPERFAMILY Toll/Interleukin receptor TIR domain 21 149 IPR035897 -
Mtr4g0395 1113 PRINTS Disease resistance protein signature 249 264 - -
Mtr4g0395 1113 PRINTS Disease resistance protein signature 326 340 - -
Mtr4g0395 1113 PRINTS Disease resistance protein signature 419 433 - -
Mtr4g0395 1113 PRINTS Disease resistance protein signature 728 744 - -
Mtr4g0395 1113 Gene3D - 222 381 IPR027417 -
Mtr4g0395 1113 MobiDBLite consensus disorder prediction 1089 1113 - -
Mtr4g0395 1113 ProSiteProfiles TIR domain profile. 25 214 IPR000157 GO:0007165
Mtr4g0395 1113 SUPERFAMILY L domain-like 525 853 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Mtr4g0395 Mtr-Chr4 4620040 4628597 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g0395 22 774 WRKY Transcription Factor Family AT4G12020 31.818 4.91e-91 320
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0395 - - lja:Lj0g3v0331109.1 1444.87