Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0392 ATGTCTTACCCAACAAGTTCCTCTTCATATGATTTACAGAGAAGAAGGACACTGCTTCTTGATCTGAACCTCACTCCATTTGAGAACGATTTGGCTCTAACAAAAAAGTATGACGTGTTTTTGAGTTTCCGAGGAGAAGACACTCGCGCATCATTCATTTCACATCTCACATCATCTCTTCAGAACGCCGGAATCCTCATTTTCAAGGATGATCAGTCGCTTCAAAGAGGAGATCACATATCCCCATCGCTAGTTCACGCAATTGAATCTTCTAAAATTTCTGTTATAGTCTTCTCAAAAAACTACGCCGATTCCAAGTGGTGTCTTCAAGAGTTGTGGCAAATAATGGTGCGTCACAGAACCACAGGCCAGGTTGTACTGCCTGTGTTCTACGATGTCGATCCTTCTGAAGTTCGTCATCAAACTGGTGAGTTTGGTAAATCATTTCTAAATCTATTGAACAGAATTTCACATGAGGAGAAATGGATGGCGTTAGAGTGGAGAAATGAGCTTCGTGTTGCGGCTGGCCTTGCTGGATTTGTTGTCCTAAATTCCAGGAACGAAAGTGAGGTTATCAAGGATATTGTTGAAAATGTTACACGTTTACTGGACAAGACAGACTTGTTCGTTGCTGATAATCCTGTGGGTATCGATTCTCGAGTGCAAGATATGATTCAACTTCTAGACACTCAACAAACAAATGATGTTCTACTACTAGGGATGTGGGGGATGGGTGGAATTGGAAAAACCACCGTTGCAAAGGCCATTTACAATAAAATTGGTCGCAATTTTGAAGGTAGGAGCTTTATTGCAAATATTAGGGAGGTTTGGGGGAAAGATTGTGGTCAAGTGAATCTACAAGAACAACTTATGTATGATATTTTTAAAGAAACCACAACCAAGATACAGAACGTTGAATCAGGAATATCTATATTAAATGGAAGACTCTGTCATAAAAGAGTACTTCTTGTACTTGACGATGTGAATAAACTGGACCAGCTAAATGCTTTGTGTGGAAGTTGTAAATGGTTTGCTCCAGGTAGTAGAATAATCATCACAACTAGAGATAAGCATATACTTAGAGGAAATAGGGTTGACAAAATATACATAATGAAAGAAATGGATGAAAGTGAATCTCTTGAGCTTTTTAGTTGGCATGCATTCAAGCAAGCGAGGCCTAGCAAAGATTTTTCAGAAATTTCCACAAATGTAGTTCAGTATTCTGGGAGATTGCCGCTAGCTCTTGAAGTCCTTGGGTCCTATTTGTTTGATAGGGAGGTAACAGAGTGGATTTGTGTATTGGAGAAACTCAAAAGAATTCCCAATGATCAAGTACATCAGAAGTTAAAAATAAGCTACGATGGCTTAAATGATGATACAGAGAAATCAATATTCCTTGACATTGCTTGTTTCTTTATTGGGATGGATCGAAATGATGTCATTCATATATTAAATGGTTCTGGATTTTTCGCAGAAATTGGAATAAGTGTCCTTGTTGAGAGAAGCCTTGTAACGGTTGATGATAAGAACAAGCTTGGCATGCATGATTTGCTGCGAGATATGGGAAGGGAAATCATTCGTGAGAAATCACCAATGGAGCCTGAGGAACGTAGTAGGTTGTGGTTTCATGATGATGTGCTTGATGTATTGTCAGAACATACTGGAACAAAAGCTGTTGAGGGACTGACTTTGAAGATGCCATGTCATAGTGCACAACGATTTAGTACTAAAACATTTGAGAACATGAAGAAACTCAGATTGCTGCAACTTTCTGGTGTACAACTTGATGGAGATTTTAAATATATTTCAAGAAATTTAAAATGGCTGCACTGGAATGGATTTCCTTTAAGATGCATACCTTCAAACTTCTATCAAAGAAATATAGTTTCCATTGAGTTAGAAAACAGCAATGCTAAACTTGTGTGGAAAGAGATTCAGAGGATGGAGCAGCTGAAGATTCTAAATCTTAGTCATTCTCATCATTTGACACAGACCCCTGACTTTTCATACTTGCCTAATCTTGAAAAGCTAGTGCTCGAAGATTGCCCAAGGCTGTCTCAGGTTTCCCATAGCATTGGACATCTCAAAAAAGTTGTTTTGATAAATTTGAAAGATTGTATTAGCCTTTGTAGCCTTCCAAGAAACATCTATACGTTGAAAACTCTGAATACTCTCATTCTATCGGGATGTTTAATGATTGACAAGTTGGAAGAGGACTTGGAACAAATGGAATCTTTAACCACCCTGATTGCAAATAATACTGGTATAACAAAAGTTCCCTTTTCATTAGTAAGGTCAAAAAGCATTGGATTTATTTCTCTGTGTGGATATGAAGGATTCTCACGTGATGTGTTTCCTTCTATCATTTGGTCTTGGATGTCACCAAATAATCTGTCACCCGCTTTTCAAACAGCTTCTCACATGTCATCCCTTGTGTCTTTAGAGGCATCAACTTGTATTTTCCACGATCTATCATCTATTTCCATTGTCCTTCCAAAGCTTCAAAGCCTTTGGCTGACATGTGGATCAGAACTTCAACTATCACAAGATGCAACACGAATTGTGAATGCTTTAAGTGTAGCAAGTTCTATGGAATTGGAATCAACTGCAACTACATCACAAGTACCAGATGTGAATTCATTAATTGAATGTCGCAGTCAAGTGAAAGTTTCAACCACTCCAAATTCCATGAAATCTCTTTTATTTCAAATGGGAATGAACTCCCTAATCACCAATATTCTGAAAGAGAGGATCTTAAAGAATTTGACTATCGATGAGCATGGTCGTTTTTCACTCCCTTGTGATAATTACCCGGATTGGTTAGCTTTCAATTCAGAAGGTTCTTCTGTAATTTTTGAAGTCCCTCAAGTGGAAGGACGTAGCTTGAAGACAATAATGTGCATTGTCTATTCTTCAAGCCCATACGACATAACATCAGATGGCCTTGAAAATGTGTTAGTGATAAATCACACAAAGACCACCATTCAACTCTATAAGAGAGAAGCATTATCCTCCTTTGAAAATGAGGAGTGGCAGAGAGTTGTAACAAATATGGAACCTGGTGACAAGGTGGAGATTGTTGTCGTTTTTGGGAACAGTTTCATTGTGATGAAGACAGCAGTTTATCTCATATATGATGAACCAGTCGTCGAAATATTGGAGCAATGTCATACACCAGATAAGAATGTTCTTGTTGATATCGGTGATGAAAATGAATGTGCTGCCATGAGGATCTCTCGCCAAGTAGAGCCTACAGATGATTTTGAACAAAAACAGAAAAGAAGAAAAATCGACTGA 3297 0.3825 MSYPTSSSSYDLQRRRTLLLDLNLTPFENDLALTKKYDVFLSFRGEDTRASFISHLTSSLQNAGILIFKDDQSLQRGDHISPSLVHAIESSKISVIVFSKNYADSKWCLQELWQIMVRHRTTGQVVLPVFYDVDPSEVRHQTGEFGKSFLNLLNRISHEEKWMALEWRNELRVAAGLAGFVVLNSRNESEVIKDIVENVTRLLDKTDLFVADNPVGIDSRVQDMIQLLDTQQTNDVLLLGMWGMGGIGKTTVAKAIYNKIGRNFEGRSFIANIREVWGKDCGQVNLQEQLMYDIFKETTTKIQNVESGISILNGRLCHKRVLLVLDDVNKLDQLNALCGSCKWFAPGSRIIITTRDKHILRGNRVDKIYIMKEMDESESLELFSWHAFKQARPSKDFSEISTNVVQYSGRLPLALEVLGSYLFDREVTEWICVLEKLKRIPNDQVHQKLKISYDGLNDDTEKSIFLDIACFFIGMDRNDVIHILNGSGFFAEIGISVLVERSLVTVDDKNKLGMHDLLRDMGREIIREKSPMEPEERSRLWFHDDVLDVLSEHTGTKAVEGLTLKMPCHSAQRFSTKTFENMKKLRLLQLSGVQLDGDFKYISRNLKWLHWNGFPLRCIPSNFYQRNIVSIELENSNAKLVWKEIQRMEQLKILNLSHSHHLTQTPDFSYLPNLEKLVLEDCPRLSQVSHSIGHLKKVVLINLKDCISLCSLPRNIYTLKTLNTLILSGCLMIDKLEEDLEQMESLTTLIANNTGITKVPFSLVRSKSIGFISLCGYEGFSRDVFPSIIWSWMSPNNLSPAFQTASHMSSLVSLEASTCIFHDLSSISIVLPKLQSLWLTCGSELQLSQDATRIVNALSVASSMELESTATTSQVPDVNSLIECRSQVKVSTTPNSMKSLLFQMGMNSLITNILKERILKNLTIDEHGRFSLPCDNYPDWLAFNSEGSSVIFEVPQVEGRSLKTIMCIVYSSSPYDITSDGLENVLVINHTKTTIQLYKREALSSFENEEWQRVVTNMEPGDKVEIVVVFGNSFIVMKTAVYLIYDEPVVEILEQCHTPDKNVLVDIGDENECAAMRISRQVEPTDDFEQKQKRRKID* 1099
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0392 1098 Gene3D - 211 370 IPR027417 -
Mtr4g0392 1098 Coils Coil 733 753 - -
Mtr4g0392 1098 PRINTS Disease resistance protein signature 238 253 - -
Mtr4g0392 1098 PRINTS Disease resistance protein signature 315 329 - -
Mtr4g0392 1098 PRINTS Disease resistance protein signature 408 422 - -
Mtr4g0392 1098 PRINTS Disease resistance protein signature 646 662 - -
Mtr4g0392 1098 SUPERFAMILY Toll/Interleukin receptor TIR domain 33 179 IPR035897 -
Mtr4g0392 1098 SMART till_3 36 177 IPR000157 GO:0007165
Mtr4g0392 1098 SMART AAA_5 235 375 IPR003593 -
Mtr4g0392 1098 Gene3D - 373 457 IPR042197 -
Mtr4g0392 1098 ProSiteProfiles TIR domain profile. 35 203 IPR000157 GO:0007165
Mtr4g0392 1098 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 43 1045 - -
Mtr4g0392 1098 SUPERFAMILY L domain-like 514 841 - -
Mtr4g0392 1098 Gene3D - 32 210 IPR035897 -
Mtr4g0392 1098 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 203 468 IPR027417 -
Mtr4g0392 1098 Pfam TIR domain 36 201 IPR000157 GO:0007165
Mtr4g0392 1098 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 43 1045 IPR044974 GO:0006952
Mtr4g0392 1098 Gene3D Ribonuclease Inhibitor 556 901 IPR032675 -
Mtr4g0392 1098 Pfam NB-ARC domain 220 446 IPR002182 GO:0043531
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Mtr4g0392 Mtr-Chr4 4581757 4588158 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g0392 34 763 WRKY Transcription Factor Family AT4G12020 31.600 2.32e-89 314
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0392 - - lja:Lj0g3v0331109.1 1460.28