Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0389 ATGATAGTTGCAATGGATTTGAATGCATCTCCGGTACCGGAGGAAGATGAAGATATTTTTGAGGAGGAGGAGCCCGTACATGTTCAACAGTTTGTTGCACCTGAAGAACGTATAGAAAGTGGAGCTGATATAGCACGCCGGGAGCGCGAGGAAAGAAAGAGACGCTTGAAAAGAGAACGTCCAGATGATAATAGACCTGTGCATCATTCACAGTCACCTCGATATGATCAACAACTATATCATGCAAAAAACCCTAAATCATATGATACAAGCAGGCTTCCTCCGGGGTGGTTAGATTGCCCTCCATCAGGCCAGGAGATTTGCTGTATGATACCTTCTAAGGTTCCTCTTGGTGAATCATTCAATGACTGCATCTTTCCTGGCAAAAGATACTCATTTAAACAAGTGATACATCAACAGAGAGTTTTAGGAAGAAAACTTGGTCTGGTGATTGATTTGACAAATACCTCTCGATACTATCCAGTGACAGATTTAAAAAAAGAGGGTATCAAGCATCTTAAGATTCAATGCAGGGGGCGTGATTCTGTACCTGAAAATTCATCTGTGAATCAGTTCGTCTATGAGGTTATACAATTTTTGTCACGCCAAAAGCAGTCAAAGAAGTATATACTTGTTCATTGTACACATGGGCATAATCGTACGGGATACATGATTATCCATTATCTAATGCGTGCTATGTCAATGTCTGTTACTCAGGCAATTAAGATTTTTTCCGATGCACGCCCTCCAGGAATCTATAAACCCGATTATATTGATGCATTGTACACATTTTATCATGAAAAAAAGCCTGAGATGGTAGTTTGTCCTCCTACTCCGGAGTGGAAAAGATCTTCTGAACTTGATCTCAACGGTGAAGCAGTTCCTGATGAGGATGATGATGGAGTCCCAGGCCCTGATTTGCAGGAGAACCATGAGACAAGCTCACAGATGACAAACGATGATGTTTTAGGAGATGAGATACCTGTGGATCAGCAAAATGCATTTCGACAGTTCTGTTATCAAACACTTAGATTGGGTGTTGGGGCCAGAGGACATACACAATTTCCAGGTTCACACCCAGTTTCTCTGAACAGGGATAATTTGCAGTTACTACGACAACGTTATTATTATGCAACATGGAAGGCTGATGGTACAAGGTATATGATGTTAATAACAATGGATGGTTGTTACTTGATCGACCGAAATTTTAATTGTCGAAGGGTCCAAATGAGGTTTCCTTGCAGGAGTACTAATGAGGGTTTGGGCGAGAAGACCCACCATTTCACATTACTGGATGGTGAGATGGTTATCGATACCTTGCCAGATTCAAATAAGCAGGAGAGAAGATACCTTATATATGATCTTATGGCAATCAACCATGTTTCAGTAATAGAGCGACCCTTCTATGAAAGATGGAAGATGCTTGAGAAAGAAGTGATTGAACCTAGGAATCACGAACGACATCAGATATACCAGAGCAGAAATCCTTACTACAGATATGATCTGGAACCATTCAGGGTAAGGAGGAAAGATTTTTGGTTGCTCTCTACTGTCACAAAGCTTTTGAAGGAATTCATTAAAAAACTCTCACATGAGGCAGATGGTCTTATATTTCAGGGTTGGGATGATCCTTATGTACCACGTACTCATGAAGGACTCTTAAAGTGGAAATACGCCAATTTAAATTCAGTTGACTTTCTGTTTGAGGTTGAAGGTGATCGGGAGCTACTTTTTGTTTATGAGCGGGGAAAGAAGAAACTCTTGGATGGGAATAAGGTTGCTTTCAAAGATGGCACAGAACCCTCATTTTATTCCGGAAAGATCATCGAGTGTTCTTGGGATTTTGATAACCTGGAATGGATATTCTTGCGAATTAGAACAGATAAATCAACTCCAAATGAGTTTAATACTTACAGAAAGGTGATGCGAAGCATAAAAGACAACATCACAGAGGAAGACTTGTTGAATGAAATAAATGAGATAATTCGCCTTCCCATGTATGCGGACAGGATAAAAAGTGATAGTAAAGCAAATCAGATTGCTCATGCCGCAAAGCAGCGAAGGTGA 2067 0.4049 MIVAMDLNASPVPEEDEDIFEEEEPVHVQQFVAPEERIESGADIARREREERKRRLKRERPDDNRPVHHSQSPRYDQQLYHAKNPKSYDTSRLPPGWLDCPPSGQEICCMIPSKVPLGESFNDCIFPGKRYSFKQVIHQQRVLGRKLGLVIDLTNTSRYYPVTDLKKEGIKHLKIQCRGRDSVPENSSVNQFVYEVIQFLSRQKQSKKYILVHCTHGHNRTGYMIIHYLMRAMSMSVTQAIKIFSDARPPGIYKPDYIDALYTFYHEKKPEMVVCPPTPEWKRSSELDLNGEAVPDEDDDGVPGPDLQENHETSSQMTNDDVLGDEIPVDQQNAFRQFCYQTLRLGVGARGHTQFPGSHPVSLNRDNLQLLRQRYYYATWKADGTRYMMLITMDGCYLIDRNFNCRRVQMRFPCRSTNEGLGEKTHHFTLLDGEMVIDTLPDSNKQERRYLIYDLMAINHVSVIERPFYERWKMLEKEVIEPRNHERHQIYQSRNPYYRYDLEPFRVRRKDFWLLSTVTKLLKEFIKKLSHEADGLIFQGWDDPYVPRTHEGLLKWKYANLNSVDFLFEVEGDRELLFVYERGKKKLLDGNKVAFKDGTEPSFYSGKIIECSWDFDNLEWIFLRIRTDKSTPNEFNTYRKVMRSIKDNITEEDLLNEINEIIRLPMYADRIKSDSKANQIAHAAKQRR* 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0389 688 Gene3D Protein tyrosine phosphatase superfamily 89 301 IPR029021 -
Mtr4g0389 688 ProSiteProfiles Dual specificity protein phosphatase domain profile. 115 271 IPR020422 GO:0006470|GO:0008138
Mtr4g0389 688 MobiDBLite consensus disorder prediction 39 70 - -
Mtr4g0389 688 MobiDBLite consensus disorder prediction 290 323 - -
Mtr4g0389 688 ProSiteProfiles ATP-dependent DNA ligase family profile. 450 585 IPR012310 GO:0003910|GO:0005524|GO:0006281|GO:0006310
Mtr4g0389 688 MobiDBLite consensus disorder prediction 1 91 - -
Mtr4g0389 688 Pfam mRNA capping enzyme, C-terminal domain 562 655 IPR013846 -
Mtr4g0389 688 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 93 282 IPR029021 -
Mtr4g0389 688 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 190 259 IPR000387 GO:0016311|GO:0016791
Mtr4g0389 688 SUPERFAMILY Nucleic acid-binding proteins 560 672 IPR012340 -
Mtr4g0389 688 Gene3D DNA ligase/mRNA capping enzyme 318 557 - -
Mtr4g0389 688 Pfam Dual specificity phosphatase, catalytic domain 145 265 IPR000340 GO:0008138|GO:0016311
Mtr4g0389 688 PANTHER MRNA (GUANINE-N(7)-)-METHYLTRANSFERASE-RELATED 3 686 - -
Mtr4g0389 688 CDD RNA_5'-triphosphatase 96 262 - -
Mtr4g0389 688 CDD Adenylation_mRNA_capping 347 558 IPR001339 GO:0004484|GO:0005524|GO:0006370
Mtr4g0389 688 PANTHER MRNA-CAPPING ENZYME 3 686 - -
Mtr4g0389 688 Gene3D - 589 664 IPR012340 -
Mtr4g0389 688 SUPERFAMILY DNA ligase/mRNA capping enzyme, catalytic domain 324 558 - -
Mtr4g0389 688 Pfam mRNA capping enzyme, catalytic domain 359 557 IPR001339 GO:0004484|GO:0005524|GO:0006370
Mtr4g0389 688 SMART dsp_5 127 267 IPR020422 GO:0006470|GO:0008138
Mtr4g0389 688 PIRSF mRNA_capping_HCE 79 688 IPR017074 GO:0004484|GO:0006370|GO:0140818
Mtr4g0389 688 ProSitePatterns Tyrosine specific protein phosphatases active site. 212 222 IPR016130 GO:0016311|GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0389 Mtr-Chr4 4549665 4565731 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g0389 1 677 Protein tyrosine phosphatase (PTP) family AT3G09100 68.521 0.0 939
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0389 K13917 - gmx:100776633 1222.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g0389 4 4549665 4565731 Mtr4g0389 4 4549665 4565731 ECH