Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0388 ATGTGTGTTCCTTTTCATGTTCCATCTATCTTACATGTTTTCATAGAAACAATGAAAATGAAGCTTCTTTTTATGTTCTTCCTTATTCCTCACAAACCCATTTGGATTCTTGCCTCTATAGTAGACCCTCTTGTTCCCTCTCCTCAAATTTCACCAATTCTTACATCAATCGCTGTATCTGCTTCCTCTCCAGATATTCATGTGGGGGATGAACATCAAAATATGGATTCACACATGAAAAAGGTAATGGCTTTTGTGGCAGCTAGCACTGGACTTGGTGCTATCATTTTGTGTTTGTTAAGCTTCTGGATTTTTTACATCAAGTATTCTTCAAAATCCAAAAAGAAAAACCTTCAAAACTCAGATGGTGAAAAAGGGCTTCGTTTAGTTCCATTTTTGAGTAAATTCAGTTCTGTGAGGTTGGTTGGTAAGAAAGGGTGTGTTCCAATCATTGACTATAAGCAATTAGAAAAAGCCACTGGAAATTTCAAGGAAAGTAACATCATAGGTGAGGGTGGTTTTGGATGTGTTTACAAGGCTAGGTTGGATGATAATTTAGATGTTGCCATCAAGAAGTTGAACTGTGAATGTCAATATGCTGAGAGAGAATTTGAGAATGAGGTGGATTTGTTAAGTAAAATTCAACATCCAAATGTAATTTCTCTACTGGGCTGTAGCAGTAATGAGGATTCAAGGTTTATTGTCTATGAGTTGATGCAAAATGGATCATTGGAAACTCAATTACATGGACCATCTCATGGCTCAGCATTGACTTGGCATATGAGGATGAAGATTGCTCTTGACACAGCTAGAGGTTTAAAATATCTGCATGAGCACTGCTACCCTGCAGTGATCCATAGAGATCTGAAATCTTCTAATATTCTTTTAGATGCAAACTTCAATGCCAAGCTTTCTGATTTTGGTCTTGCAATAACTGATGGGTCCCAGAACAAGAATAACATCAAGCTTTCAGGCACATTGGGGTATGTTGCCCCAGAGTATCTTTTAGATGGTAAATTGACAGATAAAAGTGATGTGTATGCTTTTGGAGTTGTGCTTCTTGAGCTTCTATTAGGAAGAAAGCCTGTGGAAAAACTTACACCATCTCAATGCCAGTCTATTGTCACATGGGCCATGCCACAGCTCACAGACAGATCCAAGCTTCCAAACATTGTGGATAATGTGATTAAGAATACAATGGATCCTAAGCACTTATACCAGGTTGCTGCTGTGGCTGTATTATGTGTGCAACCAGAGCCGTGCTACCGCCCTTTGATTGCAGATGTTCTACACTCCCTCATCCCTCTTGTACCTGTTGAGCTTGGAGGAACACTCAGAGTTTCACAAGTGACGCAGCAACCTAAGAATTCTAGTTAA 1377 0.3914 MCVPFHVPSILHVFIETMKMKLLFMFFLIPHKPIWILASIVDPLVPSPQISPILTSIAVSASSPDIHVGDEHQNMDSHMKKVMAFVAASTGLGAIILCLLSFWIFYIKYSSKSKKKNLQNSDGEKGLRLVPFLSKFSSVRLVGKKGCVPIIDYKQLEKATGNFKESNIIGEGGFGCVYKARLDDNLDVAIKKLNCECQYAEREFENEVDLLSKIQHPNVISLLGCSSNEDSRFIVYELMQNGSLETQLHGPSHGSALTWHMRMKIALDTARGLKYLHEHCYPAVIHRDLKSSNILLDANFNAKLSDFGLAITDGSQNKNNIKLSGTLGYVAPEYLLDGKLTDKSDVYAFGVVLLELLLGRKPVEKLTPSQCQSIVTWAMPQLTDRSKLPNIVDNVIKNTMDPKHLYQVAAVAVLCVQPEPCYRPLIADVLHSLIPLVPVELGGTLRVSQVTQQPKNSS* 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0388 458 SUPERFAMILY Protein kinase-like (PK-like) 145 433 IPR011009 -
Mtr4g0388 458 ProSiteProfiles Protein kinase domain profile. 163 434 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g0388 458 Gene3D Phosphorylase Kinase; domain 1 133 238 - -
Mtr4g0388 458 PANTHER BNAA04G14780D PROTEIN 59 454 - -
Mtr4g0388 458 ProSitePatterns Serine/Threonine protein kinases active-site signature. 284 296 IPR008271 GO:0004672|GO:0006468
Mtr4g0388 458 Gene3D Transferase(Phosphotransferase) domain 1 239 438 - -
Mtr4g0388 458 CDD STKc_IRAK 169 436 - -
Mtr4g0388 458 Pfam Protein tyrosine and serine/threonine kinase 166 401 IPR001245 GO:0004672|GO:0006468
Mtr4g0388 458 ProSitePatterns Protein kinases ATP-binding region signature. 169 192 IPR017441 GO:0005524
Mtr4g0388 458 PANTHER OS01G0750732 PROTEIN 59 454 - -
Mtr4g0388 458 SMART serkin_6 163 434 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0388 Mtr-Chr4 4533203 4538009 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g0388 150 437 Receptor kinase-like Gene Family AT3G58690 50.000 1.05e-96 295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-X Mtr4g0388 Pkinase 7.1e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0388 - - gmx:100812044 699.123