Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0378 ATGAAGAACTTGAGAATTCTTATAATTAGAAATGCAAATTTTTCCAGAGGTCCTCGAATTCTACCAAATAGTTTGAAAGTGCTAGATTGGAGTGGATATCAATCATCCTCTATACCATTCATTTTCAATCCAAAGAATCTTGCAATACTTAACCTTCCTAAAAGTTTCCTTAAACGGTTTGAATCACTCAAGGTGTTTGAGAAGTTGAACTTTCTGGATTTTGAAGGCTGCAAATTCCTTACTGAAATACGTAGTTTATCTAGAGTGCCAAATTTAGGGGCACTGTGTCTTGATTATTGCACTAATTTATTTCAAATCGATGAATCAATTGGGTTTCTTGATAAGCTTGTGTTATTAAGTGCTCAAGGATGCACCCAACTAGAAAGTTTGGTTCCCTACATCAACTTGCCATCTTTAGAGACTTTAGATCTAAGGGGTTGCTCGCGTCTTGAGAGGTTCCCAGAAGTATTGGGAGTGATGGAGAATATAAAAGATGTTCATTTAGACCAGACTGCCCTAGAACAAATACCTTTTACCATTGGAAATCTTGTTGGTCTCCAACGTTTGTTCTTGCGGGGATGCCAAGGGATGATTCAGCTACCAAACTACATATTGCCCAAACTTGAGATAATAACAACATATGGTTGTAGGGGGTTTCGATCATCAAAAGACGAAGGAAAAGTGAGTCCAAAAGTGTTTACAAATGCTATGTGTGTTTATTATGAATATGGGAAGTCCTTCCTTAATGTGTATTCTCTTAATATAAGCTCCAATATTGTCATAGAAGTATGTAGTCTTCCGTGGACTCAACTTGTGAATGAACTTAAAAAGCTTCGTTTTGATCTCTCATTTAACTCGAATATTCAGGTGAGAGTATTTGCAGGTAAGCTTTGTAGCAATGAATCACTAGTGTGTTTTTGGTTTCGAAAAAAATTCCCCAGGATAGCTCTTTGGTGTATTTTAGAACCTAAAAAGCATTTTGACAACAATATGGTGCTGAAGCATTTTGACAACAATATGGTGCTGGATGTCAAGTTCAATGTAGTCATCAACGGCACTAAGCAACTCTCTACTTCGTGTGAATACATATTTTATACGCGTAAAATGACTGACCAAATACTTAGTTGTGATTTACAATGCAAATCGGAGGTTATATTCTCAGAGAAGGAGTGGAACCATGTGGAGATTTTATGTGAGATAGAATATCTCATGCCATGTGATTCTAAAAGGGTCATGACCTACCACGACCGGACCACTAAGAGGATTCTCAAGTGGTCTGTCATATATGTGTACCCAGAAAACAATAAGGATGATTTCAGTTTCATTAACAACCCTGATTTTCCTCTGTCACCTGAACAAAAATTTCAAGAGCAGAGGAGAATACGTTATATGTACTCCACTTTCAATAAATTTGAATGA 1419 0.3679 MKNLRILIIRNANFSRGPRILPNSLKVLDWSGYQSSSIPFIFNPKNLAILNLPKSFLKRFESLKVFEKLNFLDFEGCKFLTEIRSLSRVPNLGALCLDYCTNLFQIDESIGFLDKLVLLSAQGCTQLESLVPYINLPSLETLDLRGCSRLERFPEVLGVMENIKDVHLDQTALEQIPFTIGNLVGLQRLFLRGCQGMIQLPNYILPKLEIITTYGCRGFRSSKDEGKVSPKVFTNAMCVYYEYGKSFLNVYSLNISSNIVIEVCSLPWTQLVNELKKLRFDLSFNSNIQVRVFAGKLCSNESLVCFWFRKKFPRIALWCILEPKKHFDNNMVLKHFDNNMVLDVKFNVVINGTKQLSTSCEYIFYTRKMTDQILSCDLQCKSEVIFSEKEWNHVEILCEIEYLMPCDSKRVMTYHDRTTKRILKWSVIYVYPENNKDDFSFINNPDFPLSPEQKFQEQRRIRYMYSTFNKFE* 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0378 472 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 238 IPR044974 GO:0006952
Mtr4g0378 472 PANTHER DISEASE RESISTANCE PROTEIN TAO1-LIKE 1 238 - -
Mtr4g0378 472 Gene3D Ribonuclease Inhibitor 1 132 IPR032675 -
Mtr4g0378 472 Gene3D Ribonuclease Inhibitor 133 290 IPR032675 -
Mtr4g0378 472 SUPERFAMILY L domain-like 2 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0378 Mtr-Chr4 4466904 4469930 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g0378 1 216 WRKY Transcription Factor Family AT4G12020 36.170 1.42e-27 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0378 - - mtr:MTR_3g020650 641.343