Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0359 ATGAAGTTATTTTTCTTTCTTCTTTGCTTTCATTTTTTCTTCAGCTCAGTATTTTCACTCTCATCAGATGGTCTTGCCCTTCTCTCTCTAAAAGCTGCCGTCGATCAATCCATCGACGGCGCTTTCTCCGACTGGAACGGAGGAGATTCCTACCCCTGCGGATGGTCAGGAATATCCTGTGCGAATATATCCGGTGTACCGGAGCCGCGTGTAGTTGGAATTGCACTCGCCGGAAAATCTCTCCAGGGATACATTCCGTCTGAGCTCGGCATGCTTCGCTATCTTCGACGTCTTAATCTTCATGATAATGAATTCTATGGTGTTGTTCCGGTTCAGTTGTTTAATGCTACTGCACTTCATAGTATTTTTCTTCACCGGAATAATCTCTCCGGTCCGTTTCCGGCTTCTGTCTGCACCGTTCCACGACTCCAGAATCTCGACCTCTCCGATAATTCTTTCTCTGGTGATATTCCGAATGATATCCAGAAATGTAGGCAGCTTCAGAGGCTTATTTTAGCAAGGAACAAATTCTCCGGTGAGGTTCCGACCGGAGTTTGGTCGGAACTCGATACTCTTGTCCAGCTTGACCTCTCCGGTAACGATTTCAAAGGTTCGATCCCAGACGACATTGGTGACCTCGGTTCCCTCTCCGGCACGTTGAACCTATCGTTCAACCATTTCTCCGGTAGGATTCCGAGCTCACTCGGGAAATTACCGCCAACCGTGAACTTTGATCTCCGAAGCAATAACCTAGTTGGTGAGATTCCCCAAACGGGAACATTTTCAAACCAGGGCCCAACTGCTTTTCTCGGTAACAAAAACCTGTGCGGACTTCCACTAAGAAAATCCTGCACAGGTTCAGACCGAGGGTCATCTAGTTCGTCTTCTCACAGAAACGAATCAGATAACCGTTCGAAAGGGTTGAGCCCTGGTTTGATTATTTTGATCTCGGCAGCAGATGTTGCTGGGGTCGCACTCGTTGGGCTTGTGATTGTGTATGTTTATTGGAAGAAGAAGGATGGTCACAATGTATGGTGTTGCATAAGGAAGAGAATAGGATTTGGCAATGATAATGAGGATGAGAAAGGTAGTGCTTGTACTTTGCTTCCATGTATAAATAGTTTGAAGAATGAGGAAGGTAATGATGAGAGTGAAGTAGATGTAGATGGAGGAGGGAAAGGAGAAGGTGAATTGGTGACAATTGACAAAGGTTTTAGGATTGAGCTTGATGAGCTTTTGAAGGCATCAGCATATGTGTTAGGGAAGAGTGCATTAGGGATTGTGTATAAGGTGGTGCTTGGAAATGGGATGCCGGTGGCGGTGAGGAGATTAGGGGAGGGTGGAGAAGAGAAGTATAAGGAGTTTGTAGCTGAGGTGCAAACCATTGGGAAGGTTAAGCATCCTAATATTGTGAGGTTGAGAGCTTATTATTGGGCACATGATGAAAAGCTTCTTATAAGTGATTTTATTTCCAATGGCAATTTGAACAATGCACTTCGAGGGAGAAATGGCCAACCATCTACAAACCTTTCATGGTCAACAAGGTTAAGAATTGCAAAAGGAATAGCAAGAGGCTTATCCTATCTTCATGAGTTTAGTCCTAGAAAATTTGTCCATGGTGACATAAAACCCACAAACATCTTACTTGACAACGACTTAGAACCCTACATTTCCGATTTTGGACTTAACCGACTAATCAGCATCACTGGAAATAGCCCTTCAACTGGTGGATTCATGGGTGGAGCTCTACCTTACATGATGAAATCATCACACAAAGATAGTAGGTTTTCATCAGACAACGGTCGTGGTAACAATTACAAAGCCCCTGAGGCTCGCGTACCTGGTTGTAGACCAACACAGAAATGGGATGTATACTCATTAGGTGTTGTTTTGCTTGAATTGTTAACCGGTAAATCTACTGAATCTTCTCCCACATCGGCGTCATCATCGGCTTCTGTTGAAGTTTCAGATTTGGTAAGGTGGGTGAGAAATGGGTTCGATCAAGAAAGTCCATTATCTGAAATGGTTGATCCATCTTTGCTACAAGAAGTTCGTGCTAAGAAAGAGGTATTGGCTGTGTTTCATGTAGCACTTTCATGTACTGAAGGTGATCCTGAAGTTAGGCCTAGAATGAAAACTGTCTTTGAAAACCTTGAAAAGATTGGAAGGTAA 2172 0.4392 MKLFFFLLCFHFFFSSVFSLSSDGLALLSLKAAVDQSIDGAFSDWNGGDSYPCGWSGISCANISGVPEPRVVGIALAGKSLQGYIPSELGMLRYLRRLNLHDNEFYGVVPVQLFNATALHSIFLHRNNLSGPFPASVCTVPRLQNLDLSDNSFSGDIPNDIQKCRQLQRLILARNKFSGEVPTGVWSELDTLVQLDLSGNDFKGSIPDDIGDLGSLSGTLNLSFNHFSGRIPSSLGKLPPTVNFDLRSNNLVGEIPQTGTFSNQGPTAFLGNKNLCGLPLRKSCTGSDRGSSSSSSHRNESDNRSKGLSPGLIILISAADVAGVALVGLVIVYVYWKKKDGHNVWCCIRKRIGFGNDNEDEKGSACTLLPCINSLKNEEGNDESEVDVDGGGKGEGELVTIDKGFRIELDELLKASAYVLGKSALGIVYKVVLGNGMPVAVRRLGEGGEEKYKEFVAEVQTIGKVKHPNIVRLRAYYWAHDEKLLISDFISNGNLNNALRGRNGQPSTNLSWSTRLRIAKGIARGLSYLHEFSPRKFVHGDIKPTNILLDNDLEPYISDFGLNRLISITGNSPSTGGFMGGALPYMMKSSHKDSRFSSDNGRGNNYKAPEARVPGCRPTQKWDVYSLGVVLLELLTGKSTESSPTSASSSASVEVSDLVRWVRNGFDQESPLSEMVDPSLLQEVRAKKEVLAVFHVALSCTEGDPEVRPRMKTVFENLEKIGR* 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0359 723 ProSiteProfiles Protein kinase domain profile. 414 721 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g0359 723 SUPERFAMILY L domain-like 22 281 - -
Mtr4g0359 723 ProSitePatterns Serine/Threonine protein kinases active-site signature. 537 549 IPR008271 GO:0004672|GO:0006468
Mtr4g0359 723 SUPERFAMILY Protein kinase-like (PK-like) 419 719 IPR011009 -
Mtr4g0359 723 Gene3D Phosphorylase Kinase; domain 1 403 489 - -
Mtr4g0359 723 Pfam Leucine rich repeat 141 202 IPR001611 GO:0005515
Mtr4g0359 723 SMART serkin_6 414 721 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g0359 723 Pfam Protein kinase domain 419 648 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g0359 723 CDD STKc_IRAK 420 721 - -
Mtr4g0359 723 Gene3D Transferase(Phosphotransferase) domain 1 490 722 - -
Mtr4g0359 723 PANTHER - 6 722 - -
Mtr4g0359 723 Pfam Leucine rich repeat N-terminal domain 21 60 IPR013210 -
Mtr4g0359 723 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 6 722 - -
Mtr4g0359 723 MobiDBLite consensus disorder prediction 284 306 - -
Mtr4g0359 723 MobiDBLite consensus disorder prediction 590 612 - -
Mtr4g0359 723 Gene3D Ribonuclease Inhibitor 186 286 IPR032675 -
Mtr4g0359 723 Gene3D Ribonuclease Inhibitor 20 185 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0359 Mtr-Chr4 4293000 4297195 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g0359 15 721 Receptor kinase-like Gene Family AT1G67510 65.139 0.0 899
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Mtr4g0359 Pkinase 1.3e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0359 - - var:108346287 978.008
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g1706 7 32656571 32661558 Mtr4g0359 4 4293000 4297195 PCT