Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0358 ATGGCGTATTTGTTTTCCAGAGCTTCTCAAATAATTTATGCTAGACAATACATACATTCTGGAAGTAAGGCATTGCCATATGGAATTGTTGCTAGAAAATCTAACTTCGAAATGCGTCCATTTTGGTACTCTTGTACAAATCATGGTGCAGCAGAAAAGGCAATGTCTAACAATGCTCCTCAACCAAAGTATGATGTTTTCGTAAACTTTAGGGGTGAGGACATCCGCCACGGCTTTCTTGGCCATTTGGCTAAGGCTTTTTCTCGAAAGCAAATAAATGCCTTTGTTGATGACAAACTTAAGAGGGGAGATGACATATCGAATTCACTTGTAGAAGCAATAGAAGGATCATTCATTTCATTGATCATATTCTCAGAAAACTATGCTTCTTCAAGTTGGTGTTTAGAAGAACTTTTGAAAATAATTGATTGCAAAGAGAAATATGGACAGATTGTAATACCTGTTTTCTATGGGGTAGATCCTACAAACGTACGACATCTAAAAAAGAGTTATGGAAATGCATTTGCTGAACTTGAAAAAAGGCATAGTTCGTTGAAGGTGCAGATATGGAGATATGCTTTGAACAAATCTGCTAACTTGTCAGGAATTAAGTCATTAGATTATCGGAATGACGCCGAACTACTTGAAGAAATCATCAATCTTGTGATGAAAAGGTTGAGCAAGCACCCTATTAACACAAAAGGACTTATTGGAATTGGCAAACCAATGGCTCATTTAGAATCGTTGTTACGTCAAGAGTCAGAAAAGGTTCGTGTTATTGGAATTTGGGGTATGGGAGGTATTGGCAAGACAACTATTGCCGAAGAAATTTTTAAACAAAATTGCTCTGAATATGAAGGTTGTTGTTTTTTGGCAAAGGTAAGTGAAGAATTAGGAAGACATGGAATAACATTTTTGAAAGAAAAACTTTTTTCTAGACTATTAGCAGAAGATGTGAAAATCGATTCACCAAATGGGTTGTCTAGTTATATTGAGAGAAGGATTGGCCGTATGAAGGTCCTTATTGTTCTTGATGACGTTAAGGAAGAAGGTCAGATAGAGATGTTATTTGGAACACTTGATTGGCTTCTATCTGATAGTAGGATAATTGTCACAACTAGAGACATGCAAGTACTTATTTGTAATGAAGTTGATCATGTATATGAGGTTGGGGTATTGGATTCTAGTGAAGCACTTGAGCTTTTCAACTTGAATGCATTTAAACAACGTCATCTTGAAACGGTGTACTTTGAGCTATCAAAGAAGGTGATCGATTATGCCAAAGGAATTCCATTAGTTCTTAAAGTTTTGGCTCATATGCTTCGTGGAAAAAATAAAGAAGTATGGGAAAGTCAGCTAGACAAACTTAAAAGACTGCCAGTTCAAAAAGTTCATGATGTAATGAGACTAAGTTATGATGATCTTGATCGTTTAGAGAAAAAGTATTTTTTAGATATTGCATGTTTCTTCAACGGGTTGAATTTGAAAGTGGATTACATGAAACTTTTATTGAAAGATTGTGAAAGCGATAATTCAGTGGCTGTTGGTTTAGAAAGGTTGAGAGATAAAGCTCTTATAACTATTTCTGAAGATAATATTATATCTATGCATGACATTCTACAAGAAATGGGTCGGGAGGTTGTTCGCCAAGAATCTAGTGCAGACCCTAGAAAACGCAGTCGATTATGGGATCATGATGACATTTGTGATGTATTGGAAAATGACAAGGGTACTGATGTTATTAGAAGCATAAGTGTAGACTTGTCAGGAAGAAGAAAGCTGATGTTAAGCTCTCATGCATTTGCTAAGATGACCAACCTGCAATTTTTGGATTTTCGTGGTGAATATGAATTCGGTGAAGACTTTTTATGGAATCAGAAATACGACCGAGACTGTTTGGTTCTTCTTCCTCAAGGGCTTCAATCTTTTCCAACTGATCTAAGATATCTTTCTTGGATGAATTACCCTCTAAAATCATTCCCAGAGAAGTTTTCTGCAAAGAATCTTGTTATATTGGACTTGTCAGATAGTCTAGTGGAAAAGCTTTGGTGTGGAGTGCAGGATCTAGTTAATTTAAAAGAGGTTAGACTCTCCTATTCGAAATTCCTGAAGGAGTTACCTGACTTTTCAAAAGCTACTAATCTTAAAGTATTGAATATGGCACATTGTCATAATTTGAAAAGCGTCCATCCATCTATTTTCTCTCTTGACAAGCTTGTGCATTTGGACCTAAGTCTTTGCTTTTCCCTTACAACATTTGCAAGCAATTCCCATTTAAGCTCCCTCCATTATCTCAACCTTGGATCTTGCAAGAGCCTAAGGACATTCTCAGTGACAACTTATAATTTAATTGAACTAGATCTAACTAACATTTGTATCAATGCACTGCCATCATCTTTTGGATGTCAAAGCAGGCTAGAAATACTGGTTTTAAGATACAGTGAAATTGAGAGCATACCTTCAAGCATCAAGAATCTTACAAGACTAAGAAAATTAGACATACGATTTTGCTCAAAGCTCCTGGTTCTACCCGAGCTTCCTTCATCAGTTGAAACTCTACTTGTTGAATGTAGATCACTGAAGACTGTATTGTTCCCTTCAACAGTTTCTGAACAATTCAAGGAAAACAAGAAAAGGATTGAGTTCTGGAATTGCTGGAACTTGGATGAACATTCTCTCATAAATATTGGGTTGAATCTGCAAATGAATTTGATAAAGTTTACATATCAACATTTATCGACACTGGAACATGATCACGTTGAAAGTTATGTTGATTACAAAGATAACTTTGATTCTTATCAAGCAGTGTATGTTTATCCTGGAAGTAGTATTCCAGAGTGGTTGGAGTACAAGACAACAAAGGATGACATGATTGTTGATCTCTCTCCACATTATCTCTCCCCTTTGCTGGGCTTTGTTTTTTGCTTTGTCCTTGCTAAGGACATCCATTATTGTGACCGAATTGAATTGAACATCACTACAAATGATGCTGAAGGTGACGATGAAAAGGGTGGCGTCAATATATACATGGATAGAACACGTCTCGGTATTGCATCAGATCATGTGTGCATGATATACGACCAACCATTTTCTCACTACCTAACTAGCATAGCAAACAATAAGAGAAGGTTTAAAATCAAGGTTACGGCAAGGACAGAAATCAATGTCTATAGAATGAGACCAGAGGTTGAATTAAAAGGGTTAGGAATCAGCCCCATAAACCACTCAACATATAGGAATCTCATTCAACAAATGGGAATTGTTTGA 3267 0.3636 MAYLFSRASQIIYARQYIHSGSKALPYGIVARKSNFEMRPFWYSCTNHGAAEKAMSNNAPQPKYDVFVNFRGEDIRHGFLGHLAKAFSRKQINAFVDDKLKRGDDISNSLVEAIEGSFISLIIFSENYASSSWCLEELLKIIDCKEKYGQIVIPVFYGVDPTNVRHLKKSYGNAFAELEKRHSSLKVQIWRYALNKSANLSGIKSLDYRNDAELLEEIINLVMKRLSKHPINTKGLIGIGKPMAHLESLLRQESEKVRVIGIWGMGGIGKTTIAEEIFKQNCSEYEGCCFLAKVSEELGRHGITFLKEKLFSRLLAEDVKIDSPNGLSSYIERRIGRMKVLIVLDDVKEEGQIEMLFGTLDWLLSDSRIIVTTRDMQVLICNEVDHVYEVGVLDSSEALELFNLNAFKQRHLETVYFELSKKVIDYAKGIPLVLKVLAHMLRGKNKEVWESQLDKLKRLPVQKVHDVMRLSYDDLDRLEKKYFLDIACFFNGLNLKVDYMKLLLKDCESDNSVAVGLERLRDKALITISEDNIISMHDILQEMGREVVRQESSADPRKRSRLWDHDDICDVLENDKGTDVIRSISVDLSGRRKLMLSSHAFAKMTNLQFLDFRGEYEFGEDFLWNQKYDRDCLVLLPQGLQSFPTDLRYLSWMNYPLKSFPEKFSAKNLVILDLSDSLVEKLWCGVQDLVNLKEVRLSYSKFLKELPDFSKATNLKVLNMAHCHNLKSVHPSIFSLDKLVHLDLSLCFSLTTFASNSHLSSLHYLNLGSCKSLRTFSVTTYNLIELDLTNICINALPSSFGCQSRLEILVLRYSEIESIPSSIKNLTRLRKLDIRFCSKLLVLPELPSSVETLLVECRSLKTVLFPSTVSEQFKENKKRIEFWNCWNLDEHSLINIGLNLQMNLIKFTYQHLSTLEHDHVESYVDYKDNFDSYQAVYVYPGSSIPEWLEYKTTKDDMIVDLSPHYLSPLLGFVFCFVLAKDIHYCDRIELNITTNDAEGDDEKGGVNIYMDRTRLGIASDHVCMIYDQPFSHYLTSIANNKRRFKIKVTARTEINVYRMRPEVELKGLGISPINHSTYRNLIQQMGIV* 1089
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0358 1088 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 226 486 IPR027417 -
Mtr4g0358 1088 Pfam NB-ARC domain 247 473 IPR002182 GO:0043531
Mtr4g0358 1088 SUPERFAMILY "Winged helix" DNA-binding domain 463 573 IPR036390 -
Mtr4g0358 1088 Pfam TIR domain 63 229 IPR000157 GO:0007165
Mtr4g0358 1088 PRINTS Disease resistance protein signature 259 274 - -
Mtr4g0358 1088 PRINTS Disease resistance protein signature 334 348 - -
Mtr4g0358 1088 PRINTS Disease resistance protein signature 427 441 - -
Mtr4g0358 1088 PRINTS Disease resistance protein signature 824 840 - -
Mtr4g0358 1088 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 59 1085 IPR044974 GO:0006952
Mtr4g0358 1088 Gene3D - 61 224 IPR035897 -
Mtr4g0358 1088 SMART till_3 63 200 IPR000157 GO:0007165
Mtr4g0358 1088 ProSiteProfiles TIR domain profile. 62 226 IPR000157 GO:0007165
Mtr4g0358 1088 Pfam C-JID domain 939 1048 IPR045344 -
Mtr4g0358 1088 Gene3D - 392 476 IPR042197 -
Mtr4g0358 1088 Gene3D Ribonuclease Inhibitor 780 878 IPR032675 -
Mtr4g0358 1088 Gene3D - 225 386 IPR027417 -
Mtr4g0358 1088 Gene3D Ribonuclease Inhibitor 581 779 IPR032675 -
Mtr4g0358 1088 SUPERFAMILY Toll/Interleukin receptor TIR domain 60 202 IPR035897 -
Mtr4g0358 1088 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 59 1085 - -
Mtr4g0358 1088 SUPERFAMILY L domain-like 584 903 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0358 Mtr-Chr4 4286209 4291891 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g0358 51 845 WRKY Transcription Factor Family AT4G12020 33.333 2.25e-101 350
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0358 - - mtr:MTR_4g014120 1355.12