Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0357 ATGATGCATGGTTTTGTGTTGCGGCGGTATGTAACTGCAACGGTTGATTCCATTCTGAAGATTGGAAGATTTTCTTGTAGGAATTCTCTTCTAAATTGTGAAACACTATATTCAAAGAAAACATGCTTGTGGCCTTATATAAGTTCACAATTTTCTTCAATTTCAATAATTGCAACAACAAAATATGATGTTTTCGTTAGCTTTCGTGGAAAAGACATCCGCGGGGATTTTCTTAGCCATTTGATTGAGGCTTTACGTCGAAAGAAAATAAAAGCCTTTGTTGATGATGAGCTTAAGAGGGGAGATGAAATACTACAATCACTTGTCAGAGGAATTGAAGGATCATTAATTTCCTTGATCATATTCTCACAAGACTATGCTTCTTCACGCTGGTGTTTGGAAGAACTTGTCACAATACTTCAATGCAGAGAGAAATATGGACAAATTGTTGTACCTATTTTTTATGGGATAGATCCTGCAGATGTAAGATATCAAATGAAGAGTTATGAAAATGCATTTGTTGAACATCAAAGAGTGTATAGCTCCACCAAGGTGCAAATTTGGAGACATGCTTTGAACAAATCTGCTAATTTATCTGGAATTAAGTCATCAGATTTTCGGAATGATGTCCAACTTCTTAAAGAAATCATCAAATGTGTGTCGATGAATTTGAACAATAAGCACCTAATTAGCTCAAAAGGACTCATTGGAATTGGCAAACAAATTGCACATCTAATATCATTGTTAAGCCTAGACTCACAAGATGTCCGTATTGTTGGGATTTGGGGCATGGGCGGTATTGGCAAAACAACCCTTGCAGAAGAAGTATTTCACCAGCTTCAAACTGAGTATGAAGGCTGTTGTTTTCTAGAAAACATAAGGGAAGAATCAGCAAAACATGGAATGCTTTTCTTAAAAGAAAAACTTTTTTCTGCCCTTTTAGATGAAGATGTAAAAGTTGACACTGCAAATAGATTGCCTCATTATGTTAAAACAAGGATTTCTCGTATGAAAGCCCTTATTGTTTTAGATGATGTGAATGATTTTGATCAGATGGAAATCTTAGCTGGAGATCATGATTTGTTTGGATTTGGTAGTAGAGTCATTATAACAACAAGAGATAAGCAAATGCTTTCTCAAGATGTTGATGATATATATGAGGTAGGTGCATTAGACTTTGATAAATCACTTGAGCTTTTCAATTTGAATGCTTTCAAAGTTAAGGAACTTGAAATTGAGTACTATGAGCTAACAAAGAGGGTGGTCAATTATGCCAAAGGCATTCCATTAGTTCTTAAAGTTTTGGCTCATCTTCTTCGCGGAAAAGATAAGCTAGTATGGGAAAGTCAACTAGACAAGCTTAAAAAAATGCCAAGTAAAAAAGTTCAAGATGTAACGAGATTGAGTTATGATGATCTGGATCGCAAAGAGAAAAAGATTTTTTCAGATCTTGCATGTTTTTTCAATGGATCAAATTTGAAAGTGGACTACATAAAATTTTTGTTGAAAGATTCTGAAAGTGATAATTCAGTAGCCAGTGGGTTAGAAAGGTTGAAAGATAAAGGTCTTATATCTTTTTCTAAAGATAATGTTATATCCATGCATGACATTATACAAGAAATGGGTAGGGAAATTGTTCGCCAAGAATCAAATGGAGACCCTGGAAGCTGTAGTCGGTTATGGGATGATGACGTTTATGAAGTATTAAAAAATGATACGGGGACTGAAGCAATTAGAAGCATATGGATGCAACTGCCAACACTTAGGAAACTGAAGTTAAGCCCTTCCACATTTGCTAATATGAGAAATCTACAATTTCTATATGTCCCTAGTACATGCGATCAAGATGGTTTTGATCTTCTTCCTCAAGGACTCCATTCTTTGCCACCTGAACTAAGATACCTCAGTTGGATGCATTACCCTTTGAAATCGTTGCCTGATGAATTTTCAGCTGAGAAACTCGTTATATTGGACTTGTCATATAGTCGAGTTGAAAAGCTCTGGCATGGAGTGCAGAACCTTCTGAATCTGAAAGAAGTTAAACTCTTTTTCTCAAGGTACCTGAAGGAGCTTCCGGACTTTTCAAAAGCATTGAATCTAGAAGTGCTGGACATCCATTTTTGTAGTCAGTTGACTAGTGTGCATCCATCTATTTTGTCTCTTGAAAAGCTTGAGAAATTGGATCTCAGTCATTGCACTTCCCTTACTGAACTAACAAGTGATACACATACAAGCTCCCTAAGATATCTCAACCTTAAATTTTGCAAAAATATAAGAAAATTCTCTGTGACATCAGTGAATATGACAGAGCTGGATTTACGATACACTCAAGTGAATACATTGCCTGCATCATTTGGATGTCAAAGCAAGCTTGAAATCCTACATTTAGGAAATTGTTCCATTGAAAATTTTCCTTCATGTTTTAAGAATCTAATAAAACTACAATATCTAGAGGTAAGATATTGTCAGAAACTGCAAAATCTACCAGTGCTTCCTCCATCTCTTGAAATTCTACTCGCGCAAGAGTGCACAGCACTGAAGACTGTGTTGTTCCCTTCAATTGCTGAACAATTCAAGGAGAACAGGAAAAGGGTTGTGTTTGCGAATTGCTTGAAATTGGACGAGCATTCACTCGCAAATATTGTGTTTAATGCTCAAATAAACATTACCAAATTTGCATACCAACATGTATCAGCTTCTAGAGATGAATTTCACAATAAGTTCAACAATTATAACGAAGATGATTCTCATCAAGCACTTTATGTGTATCCAGGGAGCTGTGTTCCAGATTGGTTTGAATATAAGACAACAACGGATTATGTAGCCATTGATCTACCTTCTTCTACATCGCATTCCCGTTTCCTCGGCTACATTTTCTGTTTTGTACTTGGTGGGAACCGGTTAATTGTTGACATGTTGAAATTTAACATCACTCTTTGTGTTGAGGGCCAAGGTAAAGAGGAGGACTATTTTGAACTCTACATATCTAGGCCATCTTCCATTATTGTGTCTGATCATGTTTTTATGATCTATGACCAACAATGCTCTTGCTACCTAAATAGCAAAGCCAAAGATATTACAAGGTTTAAAATCAAGGTAACAACACGTTTATCATCCATGCACCCTCGAAGTTATTCAGATATATGCATGGTGCTAAAAGGGTTTGGTGTTAACATAATAGATACCTCAGCAGATCATAATTTCATTCAGATGATGGGATTGCCTGATTCTACTCGAAATATTTCAAGCGGAATTGAGATGTGA 3264 0.3606 MMHGFVLRRYVTATVDSILKIGRFSCRNSLLNCETLYSKKTCLWPYISSQFSSISIIATTKYDVFVSFRGKDIRGDFLSHLIEALRRKKIKAFVDDELKRGDEILQSLVRGIEGSLISLIIFSQDYASSRWCLEELVTILQCREKYGQIVVPIFYGIDPADVRYQMKSYENAFVEHQRVYSSTKVQIWRHALNKSANLSGIKSSDFRNDVQLLKEIIKCVSMNLNNKHLISSKGLIGIGKQIAHLISLLSLDSQDVRIVGIWGMGGIGKTTLAEEVFHQLQTEYEGCCFLENIREESAKHGMLFLKEKLFSALLDEDVKVDTANRLPHYVKTRISRMKALIVLDDVNDFDQMEILAGDHDLFGFGSRVIITTRDKQMLSQDVDDIYEVGALDFDKSLELFNLNAFKVKELEIEYYELTKRVVNYAKGIPLVLKVLAHLLRGKDKLVWESQLDKLKKMPSKKVQDVTRLSYDDLDRKEKKIFSDLACFFNGSNLKVDYIKFLLKDSESDNSVASGLERLKDKGLISFSKDNVISMHDIIQEMGREIVRQESNGDPGSCSRLWDDDVYEVLKNDTGTEAIRSIWMQLPTLRKLKLSPSTFANMRNLQFLYVPSTCDQDGFDLLPQGLHSLPPELRYLSWMHYPLKSLPDEFSAEKLVILDLSYSRVEKLWHGVQNLLNLKEVKLFFSRYLKELPDFSKALNLEVLDIHFCSQLTSVHPSILSLEKLEKLDLSHCTSLTELTSDTHTSSLRYLNLKFCKNIRKFSVTSVNMTELDLRYTQVNTLPASFGCQSKLEILHLGNCSIENFPSCFKNLIKLQYLEVRYCQKLQNLPVLPPSLEILLAQECTALKTVLFPSIAEQFKENRKRVVFANCLKLDEHSLANIVFNAQINITKFAYQHVSASRDEFHNKFNNYNEDDSHQALYVYPGSCVPDWFEYKTTTDYVAIDLPSSTSHSRFLGYIFCFVLGGNRLIVDMLKFNITLCVEGQGKEEDYFELYISRPSSIIVSDHVFMIYDQQCSCYLNSKAKDITRFKIKVTTRLSSMHPRSYSDICMVLKGFGVNIIDTSADHNFIQMMGLPDSTRNISSGIEM* 1088
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0357 1087 Pfam C-JID domain 924 1031 IPR045344 -
Mtr4g0357 1087 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 1075 IPR044974 GO:0006952
Mtr4g0357 1087 Gene3D - 45 195 IPR035897 -
Mtr4g0357 1087 SUPERFAMILY Toll/Interleukin receptor TIR domain 59 200 IPR035897 -
Mtr4g0357 1087 Gene3D Ribonuclease Inhibitor 764 881 IPR032675 -
Mtr4g0357 1087 Pfam TIR domain 61 228 IPR000157 GO:0007165
Mtr4g0357 1087 ProSiteProfiles TIR domain profile. 60 224 IPR000157 GO:0007165
Mtr4g0357 1087 SUPERFAMILY L domain-like 591 847 - -
Mtr4g0357 1087 Gene3D - 470 544 IPR036388 -
Mtr4g0357 1087 Gene3D - 214 385 IPR027417 -
Mtr4g0357 1087 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS) 57 1075 - -
Mtr4g0357 1087 SMART till_3 61 198 IPR000157 GO:0007165
Mtr4g0357 1087 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 224 484 IPR027417 -
Mtr4g0357 1087 Gene3D Ribonuclease Inhibitor 560 763 IPR032675 -
Mtr4g0357 1087 SUPERFAMILY "Winged helix" DNA-binding domain 460 550 IPR036390 -
Mtr4g0357 1087 Gene3D - 390 469 IPR042197 -
Mtr4g0357 1087 PRINTS Disease resistance protein signature 258 273 - -
Mtr4g0357 1087 PRINTS Disease resistance protein signature 333 347 - -
Mtr4g0357 1087 PRINTS Disease resistance protein signature 425 439 - -
Mtr4g0357 1087 PRINTS Disease resistance protein signature 719 735 - -
Mtr4g0357 1087 Pfam NB-ARC domain 245 473 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0357 Mtr-Chr4 4279385 4284148 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g0357 58 829 WRKY Transcription Factor Family AT4G12020 32.783 1.87e-101 350
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0357 - - aprc:113850949 1192.95