Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0356 ATGACCAACCTGCTATTTTTGGATTTTCATGGTGGAAACTATCAAGAATGTTTGGATCTTTTTCCTCGAGGGATTCAATCTTTTCCAACTGATCTAAGATATATTTCTTGGATGAGTTACCCTCTAAAATCATTGCCAAAGAAGTTTTCTGCGGAGAATCTTGTTATATTTGACTTGTCATTTAGCCAAGTAGAAAAGCTTTGGTATGGAGTGAAGGATCTAGTTAATTTACAAGAATTTAGACTCTTTGATTCACGATCCTTGAAGGAGTTGCCAGACCTTTCAAAAGCTACAAATCTTAAAGTATTGAATATCACACAAGCTCCATTGTTGAAAAACGTCGATCCATCTGTTTTATCTCTTGACAATCTTGTCGAATTGGATCTAACTTGCTGTGATAATAATTTAAGCTTCCTCTTTTATCACCAACTGAAGAAATTCAAAAAACTAAGGACATTCTCAGAGATAGCATATAATAAATTTCCAGGACAAGATCTAACTAAGAGTTGGATCAATGAACTGCCATTATCTTTTGGATCTCAAAGCACGCTAGAAACCCTGATTTTCAAAGGCTGTAGAATTGAGAGGATACCTCCAAGCATAAAAAATCGTACTAGACTAAGATATATAAACCTGACTTTTTGCATCAAGCTTCGGACTATACCAGAGCTTCCATCATCACTTGAAACTCTATTGGCTGAATGTGAATCACTGAAGACTGTATGGTTCCCTTTAACAGCTTCTGAACAGTTCAAGGAAAACAAGAAAAGGGTTCTGTTATGGAATTGTTTGAACCTGGATAAACGTTCTCTTATAAATATTGAGTTGAATATTCAAATCAATATAATGAAGTTTGCATATCAACATTTATCGACACTGGAACATAACTATGTTGAAAGTAATGTTGATTACAAACAAACGTTTGGTTCTTATCAAGCATTTTATGTGTATCCAGGAAGTACCGTTCCTGAGTGGTTGGCGTACAAAACAACACAGGATGATATGATTGTTGATCTCTTTCCAAATCATCTCCCCCCTTTGTTGGGCTTTGTTTTTTGCTTCATCCTTGCTGAGGATTACCAACATTGTGAACAAATTGAGTTCAACATCAGTACAATTGATGACAAGGATGATGATGAAAAGGATGGTGTCAGTATTTACATGAATAGGACACCTCTCGGTATTGCATCAGATCATGTGTGCATGATACACGACCAACGATGTTCTCGGTACCTAACTAGAGTAGCAAAGAATCATACAAGGTTTAAAATCAAGGTTACAGCAAGGACAGATACGAATGTAAAGCTTAGAGAAAGACCAGAGTTGATGCATGGTTGTGGCATTTCCAATATTCAAGGCAGGCGAAAAAGTGCAGCACAAGGGGATTTTAGAAATAAAGCTATGAAACTCAGATCACTGAATTTTCTTTATATGAAACTGAATGGAAATTAA 1452 0.3595 MTNLLFLDFHGGNYQECLDLFPRGIQSFPTDLRYISWMSYPLKSLPKKFSAENLVIFDLSFSQVEKLWYGVKDLVNLQEFRLFDSRSLKELPDLSKATNLKVLNITQAPLLKNVDPSVLSLDNLVELDLTCCDNNLSFLFYHQLKKFKKLRTFSEIAYNKFPGQDLTKSWINELPLSFGSQSTLETLIFKGCRIERIPPSIKNRTRLRYINLTFCIKLRTIPELPSSLETLLAECESLKTVWFPLTASEQFKENKKRVLLWNCLNLDKRSLINIELNIQINIMKFAYQHLSTLEHNYVESNVDYKQTFGSYQAFYVYPGSTVPEWLAYKTTQDDMIVDLFPNHLPPLLGFVFCFILAEDYQHCEQIEFNISTIDDKDDDEKDGVSIYMNRTPLGIASDHVCMIHDQRCSRYLTRVAKNHTRFKIKVTARTDTNVKLRERPELMHGCGISNIQGRRKSAAQGDFRNKAMKLRSLNFLYMKLNGN* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0356 483 Gene3D Ribonuclease Inhibitor 1 163 IPR032675 -
Mtr4g0356 483 Gene3D Ribonuclease Inhibitor 164 303 IPR032675 -
Mtr4g0356 483 Pfam C-JID domain 317 384 IPR045344 -
Mtr4g0356 483 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 1 451 - -
Mtr4g0356 483 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 451 IPR044974 GO:0006952
Mtr4g0356 483 SUPERFAMILY L domain-like 2 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0356 Mtr-Chr4 4270870 4272912 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g0356 1 231 WRKY Transcription Factor Family AT4G12020 32.129 2.26e-19 90.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0356 - - mtr:MTR_4g014120 467.618