Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0355 ATGGGAAGTATTGGCAAGACAACTATTGCAGGAGAAATTTTTAACCAAAATTGCTCTGAATATGAAGGTTGTTGTTTTTTGGAAAAGGTAAGCGAGCAATTAGGAAGACATGGAAGAACATTTTTGAAAGAAAAACTTTTTTCTACACTATTAGCAGAAGATGTGAAAATCCGTTCGCCAAATGGGTTGTCTAATTATACTGTGAGAAGGATTGGTCGTATGAAGGTTCTTATTGTTCTTGATGATGTTAAGGAAGAAGGTCAGCTAGAGATGTTATTTAGAACTCTTGATTGGTTTCGATCCGATAGTAGAATAATTTTAACAACTAGAGATAAGCAAGTACTTATTGCTAATGAAGTTGAAGATGATGATCTATATCAGGTTGGGGTATTGGATTCTAGTGAAGCACTTGAGCTTTTCAATTTGAATGCCTTTAAACAAAGTCATCTTGAAATGGAGTACTATGATCTATCAAAGAAAGTGGTCGATTATGCCAAAGGAATTCCATTAGTTCTTGAAGTTTTGGCTCATCTACTTCGTGGAAAAGACAAGGAAGAATGGGAAAGTCAGCTGGACAAACTTAAAAGACTGCCGAATAAAAAAATTCAAGATGTAATGAGGCTCAGTTATGATGATCTTGATCGTTTAGAGCAAAAGTATTTTTTAGATATTGCATGTTTCTTCAACGGGTTGAGGTTGAAAGTGGATTGCATGAAACTTTTATTGAAAGATTTTGAAAGTGATAATGCAGTGGCTATTGGGTTAGAAAGGTTAAAAGATAAAGCTCTTATAACAATTTCTGAAGATAATGTAATATCTATGCATGACATTCTACAAGAAATGGGTCGGGAGGTTGTTCGTTAA 864 0.3438 MGSIGKTTIAGEIFNQNCSEYEGCCFLEKVSEQLGRHGRTFLKEKLFSTLLAEDVKIRSPNGLSNYTVRRIGRMKVLIVLDDVKEEGQLEMLFRTLDWFRSDSRIILTTRDKQVLIANEVEDDDLYQVGVLDSSEALELFNLNAFKQSHLEMEYYDLSKKVVDYAKGIPLVLEVLAHLLRGKDKEEWESQLDKLKRLPNKKIQDVMRLSYDDLDRLEQKYFLDIACFFNGLRLKVDCMKLLLKDFESDNAVAIGLERLKDKALITISEDNVISMHDILQEMGREVVR* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0355 287 Gene3D - 1 122 IPR027417 -
Mtr4g0355 287 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 286 IPR044974 GO:0006952
Mtr4g0355 287 SUPERFAMILY "Winged helix" DNA-binding domain 200 287 IPR036390 -
Mtr4g0355 287 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 224 IPR027417 -
Mtr4g0355 287 PRINTS Disease resistance protein signature 70 84 - -
Mtr4g0355 287 PRINTS Disease resistance protein signature 165 179 - -
Mtr4g0355 287 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 1 286 - -
Mtr4g0355 287 Pfam NB-ARC domain 1 211 IPR002182 GO:0043531
Mtr4g0355 287 Gene3D - 130 214 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0355 Mtr-Chr4 4270665 4275653 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g0355 1 286 WRKY Transcription Factor Family AT5G45050 35.154 4.48e-40 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0355 - - mtr:MTR_4g014220 424.861