Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0353 ATGGCGCATTTGTCTTCCGGAGCTTCATCAATAATATATGCTACACAATACAGGGATTCTGGAAGTAAGGCATTTCCAGCTGGAATTGTTGCTAGAAAATCTAAATTTGAAATGCGGCCATTATGGGACTCTGGCATAAATCATAGAATTTCAAAGCACCAGTTAAGCACATGGACTATTGCAGGAGTTAAGAAGAAAGAAAGCGTCAATAATATTGTCACAAAGGGTGTAGGAGAAAAGTCAATGTCAACCAACGCTCCCCAATCAAAATATGATGTTTTTGTGAGCTTTAGGGGCAAGGACATCCGAGACGGCTTTCTTGGCCATTTGGTTAAGGCTTTTCGTCAAAAGAAAATAAATGTCTTTGTAGACAACATAATTAAGAGGGGAGATGAAATCAAACATTCACTTGTTGAAGCAATTGAAGGCTCGTTAATTTCATTGGTCATATTCTCAAAAAATTATTCTTCTTCACATTGGTGTTTAGATGAACTTGTGAAAATAATCGAGTGCAAAAAGGATCGTGGACAGATTATAATACCTGTTTTCTATGGGGTGCGTTCTAAAATTGTACTTGATGAGCTTGAAAAAAAGGATAATTTTTCCAAGGTGGAGGATTGGAAACTCGCTTTGAAGAAATCTACTGATGTTGCAGGAATTAGGTTATCAGAGTTTCGGAATGATGCTGAGCTGCTTGAAGAAATCACCAATGTTGTGTTGATGAGGTTGAAGATGTTGAGTAAGCACCCAGTTAACTCAAAAGGACTTATTGGAATTGACAAATCAATTGCACATTTAAATTCATTGTTAAAGAAAGAGTCACAAAAGGTCCGTGTGATTGGAATTTGGGGTATGCCTGGCATTGGCAAGACAACTATTGCAGAAGAAATTTTTAACCAAAATCGCTCTGAATATGATGGTTGTTGTTTTTTGGCAAAGGTGAGTGAAAAGTTAAAATTACATGGAATAGAATCTTTAAAAGAAACCCTTTTTACTAAAATATTGGCCGAAGATGTGAAAATTGATACACCAAATAGGTTGTCCAGTGATATTGAGAGACGAATTGGACGCATGAAGGTTCTTATCATTCTTGATGATGTTAAGGACGAAGATCAGCTAGAGATGTTATTCGAAACTCTTGACTGGTTTCAATCAGATAGTAGAATAATTCTAACAGCCAGAGATAAGCAAGTACTTTTTGATAATGAAGTTGACGATGATGATCGATATGAGGTTGGGGTATTGGATTCTAGTGATGCACTTGCACTTTTCAATTTGAATGCCTTTAAACAAAGTCATCTTGAAACTGAGTTTGATGAAATATCAAAGAGGGTGGTCAATTATGCCAAAGGAAATCCATTAGTTCTTAAAGTTTTGGCTCATATGCTTCGTGGAAAAAACAAAGAAGTATGGGAAAGTCAGCTAGACAAACTTAAAAGACTGCCAGTTAAAAAAGTTCATGATGTAGTGAAACTCAGTTACGATGATCTTGATCGTTTAGAGAAAAAGTATTTTTTAGATATTGCATGTTTCTTCAATGGGTTGAGTTTGAAAGTGGATTACATGAAACTTTTATTGAAAGATTGTGAAGGTGATAATTCAGTGGCTGTTGGGATAGAAAGGTTGAAAGATAAAGCTCTCATAACTATTTCTGAAGATAATGTTATATCTATGCATGACATTCTTCAAGAAATGGGTCGGGAGGTTGTTCGCCAAGAATCTAGTGAATACCCAAACAAACGCAGTCGATTATGGGATCATGATGAAATTTGCGATGTCTTAAAAAATGACAAGGGTACTGATGCTATTAGAAGCATATGTCTAAACTTGTCAGCAATTAGGAAGCTGAAGTTAAGCCCTGATGTATTTGCTAAGATGACGAACCTGAAATTTTTGGATTTTTATGGTGGGTACAATCATGATTGTTTGGATCTTCTTCCTCAAGGGCTTCAACCTTTTCCAACTGATCTAAGATATCTTCATTGGGTACATTACCCTCTAGAGTCATTGCCAAAGAAGTTTTCTGCAGAGAAACTTGTTATATTGGACTTGTCGTATAGCCTAGTAGAAAAGCTTTGGTGTGGAGTACAGGATCTAATTAATTTAAAAGAAGTTACACTCTCTTTTTCAGAAGACCTGAAGGAGTTACCAGACTTTTCAAAAGCCATAAATCTTAAGGTATTGAATATCCAACGTTGTTATATGTTGACAAGCGTCCATCCATCTATTTTCTCTCTTGACAAGCTAGAGAATATAGTAGAACTAGATCTATCAAGATGTCCCATCAATGCACTGCCATCATCTTTTGGATGTCAAAGCAAGCTAGAAACCCTGGTTTTAAGAGGTACTCAAATTGAGAGCATACCTTCAAGCATCAAGGATCTTACAAGACTAAGAAAATTAGACATAAGCGATTGCTCGGAGCTTCTGGCTCTACCTGAGCTTCCATCATCACTTGAAACTCTACTTGTTGACTGTGTGTCACTGAAGTCTGTATTTTTCCCTTCAACAGTTGCTGAACAATTAAAGGAAAACAAGAAAAGGATTGAGTTCTGGAATTGCTTCAAATTGGATGAACGTTCTCTCATAAATATTGGGTTGAATCTTCAAATCAATTTGATGGAGTTTGCATATCAACATTTATCGACACTGGAACATGATAAAGTTGAAAGCTATGTTGATTACAAAGATATCCTTGATTCTTATCAAGCAGTGTATGTATATCCTGGAAGTAGTGTTCCAGAGTGGTTGGAGTACAAGACAACAAAGAATGATATGATTGTTGATCTCTCACCACCTCATCTCTCCCCTTTGTTGGGCTTTGTTTTCTGCTTCATCCTTGCCGAGGACTCCAAATATTGCGACATTATGGAATTTAACATCTCTACATTTGATGGTGAGGGTGACGGTGAAAAAGATGGTGTCGATATCTACATGTATAGGACATGTTGCTATACTGAATTAGATCATGTGTGCATGATATACGACCAACCATGTTCTCACTACCTAACCAGCATAGCCAAAAGTCAGACACAGGTTAAAATCAAGGTTACAGCAAGGACAATAGGTAATAAATTTAGAGAAAGAACAGAGGTGAAGCTAAAGGGGTTTGGCATCAGCCCTATAAGTCACACAATATATGACAATTTCGTTGAGCAAATGGAATTGTTTGATCGTATTAACAAATGGAAGAGGACTGTGCTGCTTAGCATCATCCTATGTATTTCCTTACTGCAGCTGAAGATGAAGACGAAGATGAAGATGAAGAAGTTGATTTAG 3279 0.3675 MAHLSSGASSIIYATQYRDSGSKAFPAGIVARKSKFEMRPLWDSGINHRISKHQLSTWTIAGVKKKESVNNIVTKGVGEKSMSTNAPQSKYDVFVSFRGKDIRDGFLGHLVKAFRQKKINVFVDNIIKRGDEIKHSLVEAIEGSLISLVIFSKNYSSSHWCLDELVKIIECKKDRGQIIIPVFYGVRSKIVLDELEKKDNFSKVEDWKLALKKSTDVAGIRLSEFRNDAELLEEITNVVLMRLKMLSKHPVNSKGLIGIDKSIAHLNSLLKKESQKVRVIGIWGMPGIGKTTIAEEIFNQNRSEYDGCCFLAKVSEKLKLHGIESLKETLFTKILAEDVKIDTPNRLSSDIERRIGRMKVLIILDDVKDEDQLEMLFETLDWFQSDSRIILTARDKQVLFDNEVDDDDRYEVGVLDSSDALALFNLNAFKQSHLETEFDEISKRVVNYAKGNPLVLKVLAHMLRGKNKEVWESQLDKLKRLPVKKVHDVVKLSYDDLDRLEKKYFLDIACFFNGLSLKVDYMKLLLKDCEGDNSVAVGIERLKDKALITISEDNVISMHDILQEMGREVVRQESSEYPNKRSRLWDHDEICDVLKNDKGTDAIRSICLNLSAIRKLKLSPDVFAKMTNLKFLDFYGGYNHDCLDLLPQGLQPFPTDLRYLHWVHYPLESLPKKFSAEKLVILDLSYSLVEKLWCGVQDLINLKEVTLSFSEDLKELPDFSKAINLKVLNIQRCYMLTSVHPSIFSLDKLENIVELDLSRCPINALPSSFGCQSKLETLVLRGTQIESIPSSIKDLTRLRKLDISDCSELLALPELPSSLETLLVDCVSLKSVFFPSTVAEQLKENKKRIEFWNCFKLDERSLINIGLNLQINLMEFAYQHLSTLEHDKVESYVDYKDILDSYQAVYVYPGSSVPEWLEYKTTKNDMIVDLSPPHLSPLLGFVFCFILAEDSKYCDIMEFNISTFDGEGDGEKDGVDIYMYRTCCYTELDHVCMIYDQPCSHYLTSIAKSQTQVKIKVTARTIGNKFRERTEVKLKGFGISPISHTIYDNFVEQMELFDRINKWKRTVLLSIILCISLLQLKMKTKMKMKKLI* 1093
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0353 1092 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 241 508 IPR027417 -
Mtr4g0353 1092 Pfam TIR domain 90 249 IPR000157 GO:0007165
Mtr4g0353 1092 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 750 1060 - -
Mtr4g0353 1092 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 86 751 - -
Mtr4g0353 1092 SUPERFAMILY L domain-like 606 871 - -
Mtr4g0353 1092 Pfam NB-ARC domain 267 496 IPR002182 GO:0043531
Mtr4g0353 1092 SUPERFAMILY "Winged helix" DNA-binding domain 484 595 IPR036390 -
Mtr4g0353 1092 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 86 751 IPR044974 GO:0006952
Mtr4g0353 1092 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 750 1060 IPR044974 GO:0006952
Mtr4g0353 1092 SUPERFAMILY Toll/Interleukin receptor TIR domain 86 218 IPR035897 -
Mtr4g0353 1092 SMART till_3 90 232 IPR000157 GO:0007165
Mtr4g0353 1092 ProSiteProfiles TIR domain profile. 89 243 IPR000157 GO:0007165
Mtr4g0353 1092 Gene3D - 88 245 IPR035897 -
Mtr4g0353 1092 Gene3D - 246 405 IPR027417 -
Mtr4g0353 1092 Gene3D - 414 498 IPR042197 -
Mtr4g0353 1092 Gene3D Ribonuclease Inhibitor 594 904 IPR032675 -
Mtr4g0353 1092 PRINTS Disease resistance protein signature 279 294 - -
Mtr4g0353 1092 PRINTS Disease resistance protein signature 354 368 - -
Mtr4g0353 1092 PRINTS Disease resistance protein signature 449 463 - -
Mtr4g0353 1092 PRINTS Disease resistance protein signature 793 809 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0353 Mtr-Chr4 4247214 4254747 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g0353 91 837 WRKY Transcription Factor Family AT4G12020 33.038 6.72e-97 337
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0353 - - mtr:MTR_4g014120 1215.68