Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0350 ATGAGTATGGTGCATGGTTTTGTATTGCGGCGGTATGTAACAGCAGCAGTTGGTTCAATTACGAAGTTTAGAAGATCTTCATGTTGGAATGAAACACTATATTCAAAGAAAGGAATTTCGACTGTTAATTCCCAACATTTCACAAAAGCGTTACGTTTGGGGCCTTGTATAAGTTCTCAATTTTCTTCAGTTTCAATAAATGCAACAACTCAATATGATGTTTTTGTTAGCTTTCGCGGCGAAGACATCCGCGCGAATTTTCTTAGTCATTTGATTGAGGATTTTGATCGAAAGAAAATAAAAGCCTTTGTAGATGATAAACTTAAGAGGGGAGATGAAATACCACAATCACTTGTCAGAGCAATTGAAGGATCGTTAATTTCCTTGATCATATTTTCACACGACTATGCTTCTTCATGTTGGTGTTTAGAAGAACTTGTTACAACACTTCAATGCAGAGAGAAATATGGACAGATCGTTATACCTATTTTTTATCAGGTAGATCCTACAGATGTAAGATATCAAAACAAGAGTTATGATAATGCATTTGTTGAACTCCAAAGAGGGTATAGCTCCACCAAGGTGCAAATTTGGAGACATGCTTTGAACAAATCTGCTAATTTATCTGGAATTAAGTCATCAGATTTTCGGAATGATGTCCAACTTCTTAAAGAAATCATCAAATGTGTGTCGATAAATTTGAACAACAAGCAACTAGTTAGCTCAAAAGGACTCATTGGAATTGGAAAACAAACTGCACATCTAAAGTCATTATTAAGCCAAGAGTCAGAAGATGTTCGTGTTGTTGGGATTTGGGGTATGGGTGGTATTGGCAAGACAACCCTTGCAGAAGAAGTGTTTCACCAACTACAATCTGAGTATGAAGGATGTTGTTTTCTAGAAAACATAAGGGAAGAATCGGCAAAACATGGAATGGTTTTCTTAAAAGAAAAGCTTATTTCTGCACTGTTAGATGAAGTTGTTAAAGTTGACATTGCAAATAGATTGCCTCATTATGTTAAAACTAGGATTCGTCGCATGAAAGTTCTTATTGTTCTAGATGATGTGAATGATTTTGATCAACTTGAAATCTTATTTGGAGATCATGATTTGTTTGGATTTGGTAGTAGAATCATTATAACAACAAGAGATAAGCAAATGCTTTCTAAAGATGTTGATGATATATTGGAGGTAGGTGCATTGGACTATGACAAATCACTTGAGCTTTTCAATTTGAATGCTTTCAAAGGTAAGGAACTTGAAATTGAGTACAATGAGCTATCAAAGAGGGTGGTGAATTATGCCAAAGGCATTCCATTAGTTCTTAAAGTTTTGGCGCATCTTGTCCGCGGAAAAGATAAGCTAGTATGGGAAAGTCAACTAGACAAGCTTAGAAAAATGCCAAGTAAAAAAGTTCAAGATGTAATGAGATTGAGTTATGATGATCTAGATCGCGAAGAGCAAAAGATTTTTTTAGATATTGCATGTTTTTTCAATGGGTCGAATTTGAAAGTGGACTACCTAAAACTATTGTGGAAAGATTCTGAAAGTGATAATTCAGTAGCCAGTGGGTTAGAAAGGTTGAAAGATAAAGATCTTGTTTCTGTTTCTAAACATAATGTTATATCTATGCATGGAATTATACAAGACATGGGTAGGGAGATTGTTCGCCAAGAATCAAGTGGAGACCCTGGAAGCCGTAGTCGATTATGGGATGATGACATTTATGAAGTATTAAAAAATGACAAGGGGACTGAAGAAATTAGAAGCATATGGATGCCATTGCCAACACTTAGGAATCTGAAGTTAAGCCCTTCAACATTTTCTAAGATGAGAAATCTACAATTTCTGTATGTCCCTAATGTATATGATCAAGATGGTTTTGATCTTCTTCCTCATGGACTTCATTCTATGCCACCTGAACTAAGATACCTCTGTTGGATGCATTACCCTTTGAAATCATTGCCAGATGAATTTTCAGCGGAGAAACTCGTTATATTGGACTTGTCATATAGTCGAGTTGAAAAACTCTGGCATGGAGTGCAGAACCTGCTGAATTTGAAAGAAGTTAAGCTCTTTTACTCAAGGTTCCTGAAGCAGTTGCCGGACTTTTCGAAAGCCCTGAATCTGGAAGTATTGGATATCCATTTTTGTGGTCAGTTGACTAGTGTGCATCCATCTATTTTCTCTCTAGAAAATCTTGAGAAATTGGATCTCAGTCATTGCACTGCCCTTACCGAGCTAACAAGTGATACACATTCAAGCTCCCTAAGATATCTTAGCCTTAAGTTTTGCAAAAATATAAGAAAGTTCTCTGTGACATCAGAGAATATGATAGAGTTGGATTTACAATACACACAAATCAATGCATTGCCTGCATCATTTGGACGTCAAACCAAGCTTGAAATCCTACATTTAGGAAACTGTTCCATTGAAAGATTTCCTTCATGTTTTAAGAATTTGATAAGACTGCAATATCTAGACATAAGATATTGCCTTAAGCTGCAAACTCTACCAGAGCTTCCTCAATCTCTTGAAGTTCTACACGCGCGAGGATGCACATCACTAGAGAGTGTGTTGTTCCCTTCAATTCCTGAACAATTCAAGGAGAACAGGTATAGGGTTGTATTCGCGAATTGCTTGAAATTGGATGAACATTCTCTTGCAAATATTGCGTTTAATGCGCAAATAAACAATATGAAATTTGCATGCCAACATGTATCAGCTTTGGAACATGATTTTCATAATAAGTTCAATGATTATAAGGATCACAATGATTCTTATCAAGCAATTTACGTGTATCCAGGAAACAGCGTTCCAGAGTGGTTTGAGTATATGACAACAACGGATTATGTAGTCATTGATCTATCTTCTTCTACATCAAGTTCCCCTTTGCTCGGCTTCATTTTCTGTTTTGTACTTGGTGGGAACCGGTTAATTGTTGCCCCGTTAAAATTTAACATCACTATCTGTGATCTTGAGGACCAAGGTAAGGAGGAGGAGCATTTTGAACTCTGCATATCTAGACCATCTGCAAGTATTGTATCCGATCATGTTTTTATGCTCTATGACAAACAATGTTCTTGCTACCTAAATAGCAAAGCCAAAGATATGACAAGGTTTGAAATCAAGGTAACAACACGTTTATCATCCATGCATCCTATAATTTATTCAGGCATGTGTATGGAGCTAAAAGGGTTTGGTGTTAACGTAATAGATGCCTCAGCATATCACAGTTTCATTCAGACGATGGGATTGCCTGATTGA 3267 0.3652 MSMVHGFVLRRYVTAAVGSITKFRRSSCWNETLYSKKGISTVNSQHFTKALRLGPCISSQFSSVSINATTQYDVFVSFRGEDIRANFLSHLIEDFDRKKIKAFVDDKLKRGDEIPQSLVRAIEGSLISLIIFSHDYASSCWCLEELVTTLQCREKYGQIVIPIFYQVDPTDVRYQNKSYDNAFVELQRGYSSTKVQIWRHALNKSANLSGIKSSDFRNDVQLLKEIIKCVSINLNNKQLVSSKGLIGIGKQTAHLKSLLSQESEDVRVVGIWGMGGIGKTTLAEEVFHQLQSEYEGCCFLENIREESAKHGMVFLKEKLISALLDEVVKVDIANRLPHYVKTRIRRMKVLIVLDDVNDFDQLEILFGDHDLFGFGSRIIITTRDKQMLSKDVDDILEVGALDYDKSLELFNLNAFKGKELEIEYNELSKRVVNYAKGIPLVLKVLAHLVRGKDKLVWESQLDKLRKMPSKKVQDVMRLSYDDLDREEQKIFLDIACFFNGSNLKVDYLKLLWKDSESDNSVASGLERLKDKDLVSVSKHNVISMHGIIQDMGREIVRQESSGDPGSRSRLWDDDIYEVLKNDKGTEEIRSIWMPLPTLRNLKLSPSTFSKMRNLQFLYVPNVYDQDGFDLLPHGLHSMPPELRYLCWMHYPLKSLPDEFSAEKLVILDLSYSRVEKLWHGVQNLLNLKEVKLFYSRFLKQLPDFSKALNLEVLDIHFCGQLTSVHPSIFSLENLEKLDLSHCTALTELTSDTHSSSLRYLSLKFCKNIRKFSVTSENMIELDLQYTQINALPASFGRQTKLEILHLGNCSIERFPSCFKNLIRLQYLDIRYCLKLQTLPELPQSLEVLHARGCTSLESVLFPSIPEQFKENRYRVVFANCLKLDEHSLANIAFNAQINNMKFACQHVSALEHDFHNKFNDYKDHNDSYQAIYVYPGNSVPEWFEYMTTTDYVVIDLSSSTSSSPLLGFIFCFVLGGNRLIVAPLKFNITICDLEDQGKEEEHFELCISRPSASIVSDHVFMLYDKQCSCYLNSKAKDMTRFEIKVTTRLSSMHPIIYSGMCMELKGFGVNVIDASAYHSFIQTMGLPD* 1089
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0350 1088 Gene3D Ribonuclease Inhibitor 577 775 IPR032675 -
Mtr4g0350 1088 Pfam C-JID domain 934 1047 IPR045344 -
Mtr4g0350 1088 SUPERFAMILY Toll/Interleukin receptor TIR domain 67 210 IPR035897 -
Mtr4g0350 1088 Gene3D - 68 231 IPR035897 -
Mtr4g0350 1088 SMART till_3 71 208 IPR000157 GO:0007165
Mtr4g0350 1088 Pfam TIR domain 71 237 IPR000157 GO:0007165
Mtr4g0350 1088 Pfam Leucine Rich Repeat 800 821 IPR001611 GO:0005515
Mtr4g0350 1088 Pfam NB-ARC domain 256 477 IPR002182 GO:0043531
Mtr4g0350 1088 ProSiteProfiles TIR domain profile. 70 234 IPR000157 GO:0007165
Mtr4g0350 1088 SUPERFAMILY L domain-like 599 857 - -
Mtr4g0350 1088 Gene3D - 232 395 IPR027417 -
Mtr4g0350 1088 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 68 1085 IPR044974 GO:0006952
Mtr4g0350 1088 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS) 68 1085 - -
Mtr4g0350 1088 Gene3D Ribonuclease Inhibitor 776 934 IPR032675 -
Mtr4g0350 1088 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 235 494 IPR027417 -
Mtr4g0350 1088 Gene3D - 400 484 IPR042197 -
Mtr4g0350 1088 PRINTS Disease resistance protein signature 268 283 - -
Mtr4g0350 1088 PRINTS Disease resistance protein signature 343 357 - -
Mtr4g0350 1088 PRINTS Disease resistance protein signature 435 449 - -
Mtr4g0350 1088 PRINTS Disease resistance protein signature 729 745 - -
Mtr4g0350 1088 SUPERFAMILY "Winged helix" DNA-binding domain 470 575 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0350 Mtr-Chr4 4224190 4229683 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g0350 67 849 WRKY Transcription Factor Family AT4G12020 32.791 3.53e-102 353
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0350 - - aprc:113850949 1189.48