Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0347 ATGGTGACTGCAAATGAATTAACGAAGCATATGGTGACTGTAATTCAAGCATTTTTGAATTCATTGTTAAAGAAAGAGTCAGAACAGGTCCGTGTTATTGGAATTTGGGGCATGGGCGGTATTGGCAAGACAACTATTGCAGAAGAAATATTTAGCCAAAATCGTTCCGATTATGATGGTTGTTGTTTCTTGGAAAAGGTCAGTGAAAGGTTAAAAGCACATGGTGGAGTTGGATGTTTAAAGGAAAGCCTTTTATCTGAACTATTGAAAGAGTCTGTGAAAGAATTGTCCGGTGATATAAAGAGACGGATTAGCCGCATGAAGGTTCTTATCGTTCTTGATGATGTCAAGGAGACAGATCAGCTCGAGATGTTATTTGGAACTCTTGATTGGTTTCAATCTGATAGTAGAATAATTCTAACATCCAGAGATAAGCAAGTACTAAGGACTAATGAAGTTGATCATGATGGTCTATATGAGGTTAGGGTATTGGATTCTAGTGAAGCACTTGAGCTTTTCAATTTGAATGCCTTTAAACAAAGTCATCCTGAAATGGAGTACTATGAGCTATCAAAGAGGGTGATCGAATATGCCAAAGGAGTTCCATTAGTTCTTAAAGTTTTGGCTCATATGCTTCGTGGAAAAAACAAAGAAGTATGGGAAAGTCAGCTAGACAAACTTAAAAGACTGCCAGTTCAAAAAGTTCATGATGTAGTGAAACTCAGTTATGATGATCTTGATCGTTTAGAGAAAAAGTATTTTTTAGATATTGCATGTTTCTTCAATGGGTTGAATTTGAAAGTGGATTACATGAAACATTTATTGAAAGATTGTGATAGTGATAATTACGTGGCTGGTGGGTTAGAAAGCTTGAAAGATAAAGCTCTTATAACTATTTCTGAAGATAATGTTATATCTATGCATGACATTCTACAAGAAATGGGTCGGGAGGTAGTTCGCCAAGAATCTAGAGAACACCCTGAAAAACGCAGTCGATTATGGGATGTTGATGACATTTGTGATGTATTGAAAAATGACAAGGGTTCTGATGCTATCAGAAGCATACGTGTAAACTTCTTAGAAAATAGGAAGCTAAAGTTAAGCCCTCATGTATTTGATAAGATGACCAACCTCCAATTTTTGGATTTTTGGGGTTATTTTGATGACTATTTGGATCTTTTTCCTCAAGGGCTTGAATCTTTTCCAACTGGTTTAAGATATCTTCATTGGATAGATTACCCTCTAAAATCATTCTCAGAGAAGTTTTTTGCTGAGAATCTTGTTATATTGGACTTGTATCTTGGTCGAATGGAAAAGCTATGGTGTGGAGTACAGAATCTAGTTAATTTAAAGGAAGTTACAATCATTTGTGCAAGCTTCCTGAAGGAGTTACCAGACTTTTCAAAAGCCACAAATCTTAAAGTATTGAGTGTCACTGCTTGTGATAATTTGGAAAGCGTCCATCCATCTATTTTTACTCTTGAGAAGCTTGTGCATTTGGACCTAAGTTCTTGTGTTTCCCTTACAACATTTACCAGCAATTCCAATTTAAGCTCCCTCCATTATCTCGACCTTTCAAATTGCCTAAAACTAAGTGAGTTCTCAGTGACTTTAGAGAATATAGTAGAACTAGATCTATCGGGCTGTCCCATCAATGCACTGCCATCATCTTTTGGATGTCAAAGCAATCTAGAAACCCTGAATTTAAGTGACACTGAAATTGAGAGCATACATTCAAGCATCAAGAATCTTACAAGACTAAGAAAATTATACATACGATTTTCCAACAAGCTTCTGGTTCTACCCGAGCTTCCTTCATCAGTTGAAAGTCTACTTGTTGACAACTGTGAATCACTAAAGACTGTATTGTTCCCTTCAACAGTTGCTGAACAATTCAAGGAAAACAAGAAAAGGGTTGAGTTCTGGAATTGCTTCAACTTGGATGAACTTTCTCTGATAAATATTGGGTTGAATCTGCAAATCAATTTGATGAAGTTTACACATCAACATTTATCAACACTGGAACATGATGAATATGCTGAAAGTTATGTTGATTACAAAGATAACTTTGATTCTTATCAAGCAGTGTATGTGTATCCTGGAAGTAGTGTTCCAAAGTGGTTGGAGTACAAGACAACAATGGATGGCATGATTGTTGATCTCTCTCCACTTCATCTCTCCCCTTTGTTGGGTTTTGTTTTTTGCTTTATCCTTCCTGAGACCAAGGAATATTGTAAGAAAGTTGAATGCAACATCACTGCAATTGATGTTGAGGGTGATGGTGAAAAGGATGGTTTCAATATTTACACGGATTTGAAACATGTCTATAAAACACCATCAGATCATGTGTGTATGATTTACGACCAACCTTGTTCTCAGCACCTAACTAGAATAGCAAAAAATCAGACAAGCTTTAAAATCAAGGTTACAGCATGGACAATACCCTGGTTTAATGAAGAGGATGAACCAAGACGAGAGGTAAAGTTAAAAGGGTTTGGCATGAGCCCCATAAACCAGTCAACATATCGCAATCTAATTCAACAAATGGAAATAAAAGAAGCAGAAAAAAAGGAAGAGGCGACAAAACAAAGTGTGACAAAAGTTGGGAGATGA 2613 0.3647 MVTANELTKHMVTVIQAFLNSLLKKESEQVRVIGIWGMGGIGKTTIAEEIFSQNRSDYDGCCFLEKVSERLKAHGGVGCLKESLLSELLKESVKELSGDIKRRISRMKVLIVLDDVKETDQLEMLFGTLDWFQSDSRIILTSRDKQVLRTNEVDHDGLYEVRVLDSSEALELFNLNAFKQSHPEMEYYELSKRVIEYAKGVPLVLKVLAHMLRGKNKEVWESQLDKLKRLPVQKVHDVVKLSYDDLDRLEKKYFLDIACFFNGLNLKVDYMKHLLKDCDSDNYVAGGLESLKDKALITISEDNVISMHDILQEMGREVVRQESREHPEKRSRLWDVDDICDVLKNDKGSDAIRSIRVNFLENRKLKLSPHVFDKMTNLQFLDFWGYFDDYLDLFPQGLESFPTGLRYLHWIDYPLKSFSEKFFAENLVILDLYLGRMEKLWCGVQNLVNLKEVTIICASFLKELPDFSKATNLKVLSVTACDNLESVHPSIFTLEKLVHLDLSSCVSLTTFTSNSNLSSLHYLDLSNCLKLSEFSVTLENIVELDLSGCPINALPSSFGCQSNLETLNLSDTEIESIHSSIKNLTRLRKLYIRFSNKLLVLPELPSSVESLLVDNCESLKTVLFPSTVAEQFKENKKRVEFWNCFNLDELSLINIGLNLQINLMKFTHQHLSTLEHDEYAESYVDYKDNFDSYQAVYVYPGSSVPKWLEYKTTMDGMIVDLSPLHLSPLLGFVFCFILPETKEYCKKVECNITAIDVEGDGEKDGFNIYTDLKHVYKTPSDHVCMIYDQPCSQHLTRIAKNQTSFKIKVTAWTIPWFNEEDEPRREVKLKGFGMSPINQSTYRNLIQQMEIKEAEKKEEATKQSVTKVGR* 871
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0347 870 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 16 859 - -
Mtr4g0347 870 Gene3D Ribonuclease Inhibitor 533 624 IPR032675 -
Mtr4g0347 870 Gene3D - 163 247 IPR042197 -
Mtr4g0347 870 Coils Coil 842 862 - -
Mtr4g0347 870 SUPERFAMILY L domain-like 357 675 - -
Mtr4g0347 870 Gene3D Ribonuclease Inhibitor 349 532 IPR032675 -
Mtr4g0347 870 PRINTS Disease resistance protein signature 32 47 - -
Mtr4g0347 870 PRINTS Disease resistance protein signature 103 117 - -
Mtr4g0347 870 PRINTS Disease resistance protein signature 198 212 - -
Mtr4g0347 870 PRINTS Disease resistance protein signature 515 531 - -
Mtr4g0347 870 ProSiteProfiles Leucine-rich repeat profile. 563 584 IPR001611 GO:0005515
Mtr4g0347 870 Gene3D - 5 155 IPR027417 -
Mtr4g0347 870 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 16 859 IPR044974 GO:0006952
Mtr4g0347 870 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 15 257 IPR027417 -
Mtr4g0347 870 SUPERFAMILY "Winged helix" DNA-binding domain 234 344 IPR036390 -
Mtr4g0347 870 Pfam NB-ARC domain 15 244 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0347 Mtr-Chr4 4182555 4185876 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g0347 21 655 WRKY Transcription Factor Family AT4G12020 35.866 8.29e-87 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0347 - - mtr:MTR_4g014120 1606.65