Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0345 ATGTCAAACAATACTCCTCCTCATTCAAAGTATGATGTTTTTGTAAGCTTTAGTGGCAAGGACATTCGTAGCAGCTTTCTTAGCCATTTGGTTAAGGCTTTTCTTCAAAAGCAAATAAATGCTTTTGTTGATGACAAACTTCACAGGGGAGATGACATATCAGATTCACTTGTTGAAGCAATCAAAGGATCATCCATTTTGTTGATCATATTTTCAGAAAAATATGCTTGTTCACATTGGTGTTTAGAAGAACTTGTGAAAATAGTTGAGTGTAAAGAGAAATATGCACAAATTGTAATACCCGTTTTCTACCGGGTAGATCCTACAGATGTACGACATCAAAAAAGGAGTTATGAAAATGCATTTGCTGAACATGAAAAAAAGTATAGCTCATATGAGGTGCACATGTGGAAACATGCTTTGAAAACATCTGCTAATTTGTCAGGAATTACATCATCAAGTTTTCAGAATGAAGCTCAGCTGCTTGATGAAATCATCACTCGTGTGTTGGAGAAATTGAGTAAGCATCAGTTGTGTGTTGTTAAATCAAAAAGACTTGTTGGAATTGACAAACCAATTGCAGATTTGAATTCATTGTTAAAGAAAGAGTCAGAACAGGTCCGTGTTATTGGAATTTGGGGCATGGGCGGTATTGGCAAGACAACTATTGCAGAAGAAATATTTAGCCAAAATCGTTCCGATTATGATGGTTGTTGTTTCTTGGAAAAGGTCAGTGAAAGGTTAAAAGCACATGGTGGGATTGGATCTTTAAAGGAAAGCCTTTTATCTGAACTATTGAAAGAATCTGTTAAAGAATTGTCCAGTGGTATTGAGAGACGGATCGGCCGCATGAAAGTTCTTATTGTTCTTGATGATGTCAATGAAACAGATCTGCTAGAGATGTTATTTGGATCTCTTGATTGGTTTCGATTAGATAGTAGAATAATTGTAACCAGTAGAAATAAGCAAGTGCTTGTTACCAATGAAGTTGATAATGATGATCTATGTGAGGTTAGGGTATTGGATTCTAGTGAAGCACTTGAGCTTTTCAATTTGAATGCCTTTAAACAAAGTCATCTTGAAATGGAGTACTATGAGCTATCAGAGAGGGTGATCGAATATGCCAAAGGAGTTCCATTAGTTCTTAAAGTTTTGGCTCATATGCTTCGTGGAAAATGTAAAGAAGTATGGGAAAGTAAGCTAGACAAACTTAAAAGACTGCCAATTCCAAAAGTTCATGATGTAATGAGGCTTAGTTATGATGATCTTGATCGTTTAGAGCAAAAGTATTTTTTAGATATTGCATGTTTCTTCAATGGGTTGGATTTGGAATTGGATTACATGAAACATTTATTGAAAGATTGTGATAGTGATAATTACGTGGCTGGTGGGTTAGAAACGTTGAAAGATAAAGCTCTTATAACTATTTCTGAAGATAATGTTATATCTATGCATGACATTCTTCAAGAAATGGGTTGGGAGGTTGTTCGGCAAGAATCTAGTGACCTTGGAAAATGCAGTCGATTATGGGATGTTGATGACATTTTTGATGTATTGAAAAATGACAAGGGTTCTGATGCTATCAGAAGCATACGTGTAGACTTCTTAGAAAATAGGAAGCTAAAGTTAAGCCCTCATGTATTTGATAAGATGACCAACCTCCAATTTTTGAATTTTTGGGTTGATTTTGATGACTATTTGGATCTTTTTCCTCAAGGGCTTGAATCTTTTCCAACTGGTCTTAGATATCTTCATTGGGTATGTTACCCTCTAAAATCATTCCCAGAGAAGTTTTCTGCAGAGAATCTTGTTATATTGGACTTGTATCTTAGTCGAATGGAAAAGCTATGGTGTGGAGTACAGAATCTAGTTAATTTAAAGGAAGTTACAATCAGTTTAGCAAGCCTGAAGGAGTTGCCAGACTTTTCAAAAGCCACAAATCTTAAAGTATTGACAGTCACTGTTTGTCCTAATTTGGAAAGCGTCCATCCATCTATTTTTACTCTTGAGAAGCTTGTGCGTTTGGACCTAGGAGGTTGCCGTTCCCTTACAACATTTACCAGCAATTCCAATTTAAGCTCCCTCCATTATCTCAGCCTTTCAGGTTGCGAAAAACTAAGTGAATTCTCAGTGACTTTAGAGAATATAGTAGAACTAGATCTATCGTGGTGTCCCATCAATGCACTGCCATCATCTTTTGGATGTCAAAGCAATCTAGAAACCCTGGTTTTAAAAGCCACTCAAATTGAGAGCATACCTTCAAGCATCAAGGATCTTACAAGACTAAGAAAATTAAACATATGCGGTTGCAAAAAGCTTCTGGCTCTACCCGAGCTTCCTTTATCAGTTGAAATCCTGGATTTAAGAAGTTGTAACATTGAGATCATACCTTCAAGCATCAAGAATCTTACGAGGCTAAGAAAACTAGACATACGATTTTCCAACAAGCTTCTGGCTCTACCCGAGCTTTCTTCATCAGTTGAAATTCTACTTGTTCACTGTGACTCACTGAAGTCTGTATTGTTCCCTTCAACAGTTGCTGAACAATTCAAGGAAAACAAGAAAGAAGTTAAGTTCTGGAATTGCTTGAACTTGGATGAGCGTTCTCTGATAAATATTGGGTTGAATCTGCAAATCAATTTGATGAAGTTTGCATATCAAGATTTATCAACAGTGGAACATGATGATTATGTTGAAACTTATGTTGATTACAAAGATAACTTTGATTCTTATCAAGCATTGTATGTGTATTCTGGAAGTAGTGTTCCAGATTGGTTTGAGTACAAGACAACAAACGAGACAACAAACGATGACATGATTGTTGATCTCTCTCCACTTCATCTCTCCCCTTTGTTGGGTTTTGTTTTTTGCTTTATCCTTCCTGAGAACGAGGAATATGATAAGAAAGTTGAATTCAACATCACTACAATTGATGTTGAGGGTGATGGTGAAAAGGATGGTTTCAATATTTACACGGATTTGGAACATGTCTTTAATACACAATCAGATCATGTGTGTATGATTTACGACCAACCTTGCTCTCAGTACCTAACTAGAATAGCAAAAAATCAGACAAGCTTTAAAATCAAGGTTACAGCAAGGTCAAGTGTGCTGAAGTTAAAAGGGTTTGGCATGAGCCCCATAAACCAGTCAACACATCGCAATCTAATTCAACAAATGGAAATAAAAGAAGCAGAAAAAAAGGAAGAGGCGACAAAACAAAGTGTGACAAAAGTTGGGAGATGA 3246 0.3635 MSNNTPPHSKYDVFVSFSGKDIRSSFLSHLVKAFLQKQINAFVDDKLHRGDDISDSLVEAIKGSSILLIIFSEKYACSHWCLEELVKIVECKEKYAQIVIPVFYRVDPTDVRHQKRSYENAFAEHEKKYSSYEVHMWKHALKTSANLSGITSSSFQNEAQLLDEIITRVLEKLSKHQLCVVKSKRLVGIDKPIADLNSLLKKESEQVRVIGIWGMGGIGKTTIAEEIFSQNRSDYDGCCFLEKVSERLKAHGGIGSLKESLLSELLKESVKELSSGIERRIGRMKVLIVLDDVNETDLLEMLFGSLDWFRLDSRIIVTSRNKQVLVTNEVDNDDLCEVRVLDSSEALELFNLNAFKQSHLEMEYYELSERVIEYAKGVPLVLKVLAHMLRGKCKEVWESKLDKLKRLPIPKVHDVMRLSYDDLDRLEQKYFLDIACFFNGLDLELDYMKHLLKDCDSDNYVAGGLETLKDKALITISEDNVISMHDILQEMGWEVVRQESSDLGKCSRLWDVDDIFDVLKNDKGSDAIRSIRVDFLENRKLKLSPHVFDKMTNLQFLNFWVDFDDYLDLFPQGLESFPTGLRYLHWVCYPLKSFPEKFSAENLVILDLYLSRMEKLWCGVQNLVNLKEVTISLASLKELPDFSKATNLKVLTVTVCPNLESVHPSIFTLEKLVRLDLGGCRSLTTFTSNSNLSSLHYLSLSGCEKLSEFSVTLENIVELDLSWCPINALPSSFGCQSNLETLVLKATQIESIPSSIKDLTRLRKLNICGCKKLLALPELPLSVEILDLRSCNIEIIPSSIKNLTRLRKLDIRFSNKLLALPELSSSVEILLVHCDSLKSVLFPSTVAEQFKENKKEVKFWNCLNLDERSLINIGLNLQINLMKFAYQDLSTVEHDDYVETYVDYKDNFDSYQALYVYSGSSVPDWFEYKTTNETTNDDMIVDLSPLHLSPLLGFVFCFILPENEEYDKKVEFNITTIDVEGDGEKDGFNIYTDLEHVFNTQSDHVCMIYDQPCSQYLTRIAKNQTSFKIKVTARSSVLKLKGFGMSPINQSTHRNLIQQMEIKEAEKKEEATKQSVTKVGR* 1082
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0345 1081 ProSiteProfiles TIR domain profile. 9 173 IPR000157 GO:0007165
Mtr4g0345 1081 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 8 780 - -
Mtr4g0345 1081 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 783 1070 - -
Mtr4g0345 1081 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 179 434 IPR027417 -
Mtr4g0345 1081 Gene3D - 340 424 IPR042197 -
Mtr4g0345 1081 Pfam NB-ARC domain 197 413 IPR002182 GO:0043531
Mtr4g0345 1081 Gene3D - 172 332 IPR027417 -
Mtr4g0345 1081 Pfam TIR domain 10 177 IPR000157 GO:0007165
Mtr4g0345 1081 SUPERFAMILY "Winged helix" DNA-binding domain 411 520 IPR036390 -
Mtr4g0345 1081 SUPERFAMILY Toll/Interleukin receptor TIR domain 2 149 IPR035897 -
Mtr4g0345 1081 SUPERFAMILY L domain-like 532 864 - -
Mtr4g0345 1081 SMART till_3 10 147 IPR000157 GO:0007165
Mtr4g0345 1081 Gene3D Ribonuclease Inhibitor 527 713 IPR032675 -
Mtr4g0345 1081 Gene3D Ribonuclease Inhibitor 714 878 IPR032675 -
Mtr4g0345 1081 Gene3D - 8 171 IPR035897 -
Mtr4g0345 1081 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 783 1070 IPR044974 GO:0006952
Mtr4g0345 1081 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 8 780 IPR044974 GO:0006952
Mtr4g0345 1081 PRINTS Disease resistance protein signature 209 224 - -
Mtr4g0345 1081 PRINTS Disease resistance protein signature 280 294 - -
Mtr4g0345 1081 PRINTS Disease resistance protein signature 375 389 - -
Mtr4g0345 1081 PRINTS Disease resistance protein signature 690 706 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0345 Mtr-Chr4 4177408 4199299 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g0345 11 836 WRKY Transcription Factor Family AT4G12020 34.030 1.45e-110 377
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0345 - - mtr:MTR_4g014160 1783.46