Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0344 ATGGAGAACAATACTTGGCATAATGTTAAAGATTTGATTTTTACCTTTTTTAACACAAACCCACTTCAGAAATGTAGAAAAAACCAAAAGGGTCATTTTATTTTATTGGTTTTTGTGCTTTTTATTGGTTTTACTATTGAGCCTGTTTTAGGTAATTTATGGGATGGTGTGGTTGTAACACAATCTGATTTTCAATCCTTAAGAGCTATTAAAAATGAGCTTATTGATTCAAAAGGGGTATTGAAAAGCTGGAATGATAGTGGTATAGGTGCTTGTTCAGGTAATTGGATTGGAATCAAATGTTTGAAAGGGGAAGTTGTTGCAATTCAGCTTCCTTGGAAAAGTTTAGGCGGAAAAATTTCTGAGAAAATTGGTCAACTTCAATCTCTTAGAAAATTAAGTCTTCATGATAATGCACTTGTTGGTTCTATTCCTATTTCTCTTGGTTTTTTACCTAATCTTAGAGGTGTTTATCTTTTCAATAACAAGCTTTCAGGTTCTATTCCACCTTCTATTGCTAATTGTCCAATGCTTCAATCTTTTGATGTTAGTCATAATTTGCTTATTGGTAAAATCCCTTTTGGTTTAGCAAATTCCACTAGGATTTTCAGGATTAATTTGAGTTATAATTCACTTTCTGGTTCAATTCCTAGCTCATTCATGATGTCACATTCTTTAACTATTCTTTCTCTTCAATTCAATAATTTAACTGGTCCTATTCCTAGTGAATTAGGTGCAGTTTCAAGGCTTAGAGTTCTTGATTTGTCAAACAATGCTATCAATGGTAGTTTTCCTTTAAGCTTCTCTAATATGTCTTCTCTTGTTTCATTGAATCTTGAAAACAATCAAATTGAAAATCATGTGCCTGATACTTTTGATATGTTGCATAACCTTTCTGCGATTAACTTGAAGAACAATAAATTTGATGGTAAAATTCCATCAACTATTGGTAATATCTCAAGCATTAGTCAAATTGATTTGTCTCATAACAAATTTTCTGGTGAAATTCCTGATTCTTTTACTAAGCTAGTGAATCTAAGTTCATTCAATGTGTCTCGTAACAATCTATCTGGTCCTGTTCCATCACTACTTTCCAAAAGATTCAATGCTAGTTCATTTGAAGGAAACTTTGGTCTATGTGGTTACATAAGTTCAAAACCATGTCCTTCAGCACCACCGCCGCATAATCTTCCAGCTCAATCACCAGATGAATCTCCTCCAAAGAAACATCACAGAAAATTAAGCACAAAGGACATTATCCTCATAGTAGCTGGTGTTCTTTTGTTAATTTTGCTATTACTTTGCTGCTTTTTGCTTTGTTGTTTAGTCAGGAAAAGAGCTTCTTCAAGCAGAAAGAGTAGTAAAGCTGCTAAAGCTGCTGCTTCTGCTAGGAGTGTGGAGAAAGGTGGTTCAGCTGGTGGTGGTGAAGCTGTATCGGGAGGTGAAGCCGGTGGCAAGCTGGTTCACTTTGATGGACCATTTGTGTTCACCGCTGATGATCTTTTGTGTGCAACTGCTGAGATAATGGGCAAAACAGCTTATGGAACAGCTTACAAGGCAACATTGGAAGATGGTAATCAAGTTGCTGTGAAGAGATTGAGGGAGAAGACTACTAAAGGACATAAGGAGTTTGAAGCTGAGGTTGCATCACTTGGCAAAATCAGACATCCGAATCTTTTGGCGCTTAGGGCTTACTATCTTGGACCTAAAGGAGAGAAGCTGCTTGTCTTTGATTACATGAGTAGAGGAAGCCTAGCATCATTCCTTCATGCTCGTGGACCTGAAATTGTCGTCGAATGGCCAACAAGGATGAAAATAGCTATTGGAATCACTAATGGTCTATTTTGCTTACACAACCAAGAGAATATAGTTCATGGGAATCTCACCTCAAGCAACATACTATTGGATGAGCAAACAAATCCTCACATCACAGATTTTGGTCTTTCAAGACTAATGACAACTTCTGCCAACACCAACATCATTGCTACAGCAGGAAGTCTTGGATACAATGCACCGGAGCTTTCAAAGACAAAGAAACCTACCACAAAAACCGATGTTTACAGTCTCGGCGTCATTCTTTTGGAGCTTTTAACTGGTAAACCACCAGGAGAACCAACAAATGGAATGGACTTGCCTCAATATGTTGCATCCATTGTTAAAGAAGAGTGGACAAATGAAGTGTTTGATTTGGAACTCATGAGGGATGGACCAACCATAGGAGATGAACTTCTTAATACATTGAAATTAGCTTTGCATTGTGTTGATCCATCACCTTCTGCTAGGCCTGAGGTTAAACAAGTTTTGCAGCAATTAGAAGAGATTAAACCAGAATTGGTTGAAGTTGAAGTTGATGATGATGGAGCAAAGGTTCAAACAAATGAATAA 2385 0.369 MENNTWHNVKDLIFTFFNTNPLQKCRKNQKGHFILLVFVLFIGFTIEPVLGNLWDGVVVTQSDFQSLRAIKNELIDSKGVLKSWNDSGIGACSGNWIGIKCLKGEVVAIQLPWKSLGGKISEKIGQLQSLRKLSLHDNALVGSIPISLGFLPNLRGVYLFNNKLSGSIPPSIANCPMLQSFDVSHNLLIGKIPFGLANSTRIFRINLSYNSLSGSIPSSFMMSHSLTILSLQFNNLTGPIPSELGAVSRLRVLDLSNNAINGSFPLSFSNMSSLVSLNLENNQIENHVPDTFDMLHNLSAINLKNNKFDGKIPSTIGNISSISQIDLSHNKFSGEIPDSFTKLVNLSSFNVSRNNLSGPVPSLLSKRFNASSFEGNFGLCGYISSKPCPSAPPPHNLPAQSPDESPPKKHHRKLSTKDIILIVAGVLLLILLLLCCFLLCCLVRKRASSSRKSSKAAKAAASARSVEKGGSAGGGEAVSGGEAGGKLVHFDGPFVFTADDLLCATAEIMGKTAYGTAYKATLEDGNQVAVKRLREKTTKGHKEFEAEVASLGKIRHPNLLALRAYYLGPKGEKLLVFDYMSRGSLASFLHARGPEIVVEWPTRMKIAIGITNGLFCLHNQENIVHGNLTSSNILLDEQTNPHITDFGLSRLMTTSANTNIIATAGSLGYNAPELSKTKKPTTKTDVYSLGVILLELLTGKPPGEPTNGMDLPQYVASIVKEEWTNEVFDLELMRDGPTIGDELLNTLKLALHCVDPSPSARPEVKQVLQQLEEIKPELVEVEVDDDGAKVQTNE* 795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0344 794 CDD STKc_IRAK 509 774 - -
Mtr4g0344 794 SMART LRR_typ_2 151 175 IPR003591 -
Mtr4g0344 794 SMART LRR_typ_2 127 149 IPR003591 -
Mtr4g0344 794 SMART LRR_typ_2 343 366 IPR003591 -
Mtr4g0344 794 SMART LRR_typ_2 247 270 IPR003591 -
Mtr4g0344 794 SMART LRR_typ_2 271 294 IPR003591 -
Mtr4g0344 794 SUPERFAMILY L domain-like 115 367 - -
Mtr4g0344 794 Pfam Leucine rich repeat 248 308 IPR001611 GO:0005515
Mtr4g0344 794 MobiDBLite consensus disorder prediction 391 411 - -
Mtr4g0344 794 Pfam Protein tyrosine and serine/threonine kinase 507 771 IPR001245 GO:0004672|GO:0006468
Mtr4g0344 794 Gene3D Ribonuclease Inhibitor 202 264 IPR032675 -
Mtr4g0344 794 Gene3D Transferase(Phosphotransferase) domain 1 581 790 - -
Mtr4g0344 794 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 29 245 - -
Mtr4g0344 794 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 232 788 - -
Mtr4g0344 794 Gene3D Phosphorylase Kinase; domain 1 509 580 - -
Mtr4g0344 794 Pfam Leucine rich repeat N-terminal domain 62 101 IPR013210 -
Mtr4g0344 794 ProSiteProfiles Protein kinase domain profile. 503 778 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g0344 794 Gene3D Ribonuclease Inhibitor 59 201 IPR032675 -
Mtr4g0344 794 SUPERFAMILY Protein kinase-like (PK-like) 507 777 IPR011009 -
Mtr4g0344 794 Gene3D Ribonuclease Inhibitor 265 389 IPR032675 -
Mtr4g0344 794 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 29 245 - -
Mtr4g0344 794 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 232 788 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0344 Mtr-Chr4 4168247 4171708 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g0344 54 776 Receptor kinase-like Gene Family AT3G51740 64.129 0.0 930
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Mtr4g0344 PK_Tyr_Ser-Thr 1.5e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0344 - - aip:107625805 1144.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g0344 4 4168247 4171708 Mtr4g0344 4 4168247 4171708 ECH