Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0336 ATGATGATCCTTTTGGTCTGGATCATTGCTCTCTTGGGCTTTCTCAAAGTTGCTGCTTCATTGTTGCGTCGCGGTCAAGAGAGACGTGATGGGGCGGGTCTTATTCCTGAGGTTGAGGGTGTAGCAGAAAGGGAAATGCCAAACAATACTCCTCAATTAAAGTATGATGTTTTTGTAAGCTTTAGGGGCGAGGATATCCGCCACAGCTTTCTTAGCCATTTGGTTAAGGCTTTTCCTCGAAAGCAAATAAATGCCTTTGTTGATGACGCACTTACGAGGGGAGATGACATATCACATTCACTTTTTGAAGCAATTGAAGGATCTCCCATTTCATTGGTCATATTCTCAAAAAACTATGCTTCTTCACATTGGTGTTTAGATGAGCTTGTGAAAATAATCGAGTGCAAAGAGAAATATGGACAGATTGTATTACCTATTTTCTACGGAGTAAAACCCACAAATGTACGACATCAAAAGAAGAGTTATGAAAATGCATTTTCTAAACTTGAAAAAATGCATAATTCGTCTCAGGTGCAGATATGGAGAGACGCTTTGAAAATATCTTGTAATTCGTCTGGAATTACATCATCAAGTTTTCCGAATGATGCCGTGCTGGTGGAAGAAATCACCAAGGTTGTGTTGATGAGGTTGAGTGAGCTGAAGAATTCACCGGTTAACTCAAAAGAACTTGTTGGAATTGACAAACCAATTGCGGATTTGAATTCATTGTTAAAGAAAGAGTCAGAACAGGTCCGTGTTATTGGAATTTGGGGCATGGGCGGTATTGGCAAGACAACTATTGCAGAAGAAATATTTAGCCAAAATCGTTCCGATTATGATGGTTGTTGTTTCTTGGAAAAGGTCAGTGAAAGGTTAAAAACACCTGGTGGAGTTGGATGTTTAAAGGAAAGCCTTTTATCTGAACTATTGAAAGAGTCTGTGAAAGAATTGTCCGGTGATATAAAGAGACGGATTAGCCGCATGAAGGTTCTTATCGTTCTTGATGATGTCAAGGAGACAGATCAGCTCGAGATGTTATTTGGAACTCTTGATTGGTTTCAATCTGATAGTAGAATAATTCTAACATCCAGAGATAAGCAAGTACTAAGGAATAATGAAGTTGAAGATGATGATATATATGAGGTTGGGGTATTGGATTCTAGTGAAGCACTTGTGCTTTTCAATTCGAATGCCTTTAAACAAAGTCATCTTGAAATGGAGTACTATGAGCTATCAAAGAGTGTGGTCAATTATGCCAAAGGGATTCCGTTAGTTCTTAAGGTTTTAGCTCATATGCTTCGTGGAAAAAAGAAAGAAGTATGGGAAAGTCAGCTAGACAAACTTAGAAGACTGCCAGTTCAAAAAGTTTATGATGCAATGAGACTCAGTTATGATGATCTTGATCGTTTAGAGCAAAAGTATTTTTTAGATATTGCATGTTTCTTCAATGGGTTGGATTTGAAAGTGGATTACATGAAACATTTATTGAAAGATTGTGATAGTGATAATTACGTGGCTGGTGGGTTAGAAACGTTGAAAGATAAAGCTCTTATAACTATTTCTGAAGATAATGTTATATCTATGCATGACATTCTTCAAGAAATGGGTTGGGAGATTGTTCGGCAAGAATCTAGTGACCTTGGAAAACGCAGTCGATTATGGAATCCTGATGAAATTTATGATGTATTGAAAAATGACAAGGGTACCAATGCTATTAGAAGCATAAGTTTGCCAACAATGAGGGAGCTGAAGTTAAGCCGTCATGTATTTGATAAGATGACCAACCTGCGGTTTTTGTATTTTGGTGGTATAGAAGGTTTTGATTGTTTTCCTCAAGGGCTTCAATCTTTTCCACTTGGTATAAAATATCTTCATTGGACATACTGCCCTCTAAAATCATTCCCAGAGAAGTTTTCTGCAAAGAATCTTGTTATATTGGACTTGTCAGATAGTCTAGTGGAAAAGCTTTGGTGTGGAGTGCAGCAGGATCTAATTAATTTAAAAGAAGTTAGACTCTCTTATTCAATGTTATTAAAGGAGTTACCAGACTTTTCAAAAGCCATAAATCTTAAGGTATTAAATATCTCAAGTTGTTATCAGCTGAAAAGCGTCCATCCATCTATTTTATCTCTTAACAGGCTTGAGCAATTGGGTCTATCGTGGTGTCCCATCAATGCACTGCCATCATCTTTTGGATGTCAAAGAAAGCTAGAAATACTGGTTTTAAGATACAGTGATATTGAGATCATACCTTCAAGCATCAAGAATCTTACAAGACTAAGAAAACTAGACATACGAGGTTGCTTGAAGCTTGTGGCTTTACCCGAGCTTCCTTCATCAGTTGAAACTCTACTTGTTAAAGATTCTTTTTCACTGAAGACTGTATTGTTCCCTTCAACAGTTGCTGAACAATTCAAGGAAAACAAGAAAAGTGTTGAGTTCTGGAATTGCGAGAACTTGGATGAAAGTTCTCTCATAAATGTTGGGTTGAATGTTCAAATCAATTTAATGAAGTATGCTAACTTTGGTTCTGATGAAGCAATGTATGTGTATCCTGGAAGTAGTATTCCAGAGTGGTTGGAGTACAAGACAACAAAGGATGATATGATTATTGATCTCTCTCAGCCTCGTCTCTCACCTTTATTGGGCTTTGTCTTTTGCATTGTTTTTCCTAAGTGTTTACTAAATTTCAGCAAATTTATATTGAAAATCACTACAATTGAGGGTGACAATGAAAAGGATGGTGTCGATATCAACTTGCGTAGTATGCCATTGGATATTTATTTAGATCATGTATGCATGATACAGGACCAACGATGTTCTGGGTACCTAACTAGAATAGCAAAAAATCAGACAAGCTTTAAAATCAAGGTTACAGCAATGTCAGGATTCATCAAGGTGAAGTTAAAAGGGTTTGGCATGAGCCCCATAAACCAGTCAACATATCAAAACCTCATTCAACAAATGGAATACGAATGTGCTTAA 2985 0.3712 MMILLVWIIALLGFLKVAASLLRRGQERRDGAGLIPEVEGVAEREMPNNTPQLKYDVFVSFRGEDIRHSFLSHLVKAFPRKQINAFVDDALTRGDDISHSLFEAIEGSPISLVIFSKNYASSHWCLDELVKIIECKEKYGQIVLPIFYGVKPTNVRHQKKSYENAFSKLEKMHNSSQVQIWRDALKISCNSSGITSSSFPNDAVLVEEITKVVLMRLSELKNSPVNSKELVGIDKPIADLNSLLKKESEQVRVIGIWGMGGIGKTTIAEEIFSQNRSDYDGCCFLEKVSERLKTPGGVGCLKESLLSELLKESVKELSGDIKRRISRMKVLIVLDDVKETDQLEMLFGTLDWFQSDSRIILTSRDKQVLRNNEVEDDDIYEVGVLDSSEALVLFNSNAFKQSHLEMEYYELSKSVVNYAKGIPLVLKVLAHMLRGKKKEVWESQLDKLRRLPVQKVYDAMRLSYDDLDRLEQKYFLDIACFFNGLDLKVDYMKHLLKDCDSDNYVAGGLETLKDKALITISEDNVISMHDILQEMGWEIVRQESSDLGKRSRLWNPDEIYDVLKNDKGTNAIRSISLPTMRELKLSRHVFDKMTNLRFLYFGGIEGFDCFPQGLQSFPLGIKYLHWTYCPLKSFPEKFSAKNLVILDLSDSLVEKLWCGVQQDLINLKEVRLSYSMLLKELPDFSKAINLKVLNISSCYQLKSVHPSILSLNRLEQLGLSWCPINALPSSFGCQRKLEILVLRYSDIEIIPSSIKNLTRLRKLDIRGCLKLVALPELPSSVETLLVKDSFSLKTVLFPSTVAEQFKENKKSVEFWNCENLDESSLINVGLNVQINLMKYANFGSDEAMYVYPGSSIPEWLEYKTTKDDMIIDLSQPRLSPLLGFVFCIVFPKCLLNFSKFILKITTIEGDNEKDGVDINLRSMPLDIYLDHVCMIQDQRCSGYLTRIAKNQTSFKIKVTAMSGFIKVKLKGFGMSPINQSTYQNLIQQMEYECA* 995
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0336 994 Gene3D - 220 379 IPR027417 -
Mtr4g0336 994 Gene3D Ribonuclease Inhibitor 560 794 IPR032675 -
Mtr4g0336 994 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 50 722 - -
Mtr4g0336 994 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 716 993 - -
Mtr4g0336 994 ProSiteProfiles TIR domain profile. 53 217 IPR000157 GO:0007165
Mtr4g0336 994 Pfam TIR domain 54 233 IPR000157 GO:0007165
Mtr4g0336 994 SUPERFAMILY "Winged helix" DNA-binding domain 455 564 IPR036390 -
Mtr4g0336 994 Pfam NB-ARC domain 241 458 IPR002182 GO:0043531
Mtr4g0336 994 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 216 478 IPR027417 -
Mtr4g0336 994 Gene3D - 384 468 IPR042197 -
Mtr4g0336 994 Gene3D - 52 219 IPR035897 -
Mtr4g0336 994 SMART till_3 54 191 IPR000157 GO:0007165
Mtr4g0336 994 PRINTS Disease resistance protein signature 253 268 - -
Mtr4g0336 994 PRINTS Disease resistance protein signature 324 338 - -
Mtr4g0336 994 PRINTS Disease resistance protein signature 419 433 - -
Mtr4g0336 994 PRINTS Disease resistance protein signature 755 771 - -
Mtr4g0336 994 SUPERFAMILY L domain-like 573 834 - -
Mtr4g0336 994 SUPERFAMILY Toll/Interleukin receptor TIR domain 51 193 IPR035897 -
Mtr4g0336 994 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 716 993 IPR044974 GO:0006952
Mtr4g0336 994 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 50 722 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0336 Mtr-Chr4 4086315 4094374 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g0336 55 775 WRKY Transcription Factor Family AT4G12020 33.074 2.20e-89 312
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0336 - - mtr:MTR_4g014120 1214.13