Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0334 ATGAGGTTGAGTAAGCTCAAGAATTCACCAGTTAAATCAAAAGAACTTGTTGGAATTGACAAATCTATTTCACATTTGAAATCATTGTTAAAGAAAGAGTCACAAAAGGCCCCTGTTATCGGAATTTGGGGTATGGGTGGTATTGGCAAGACAACTATTGCAAAAGAATTATTTGACCAAATTTGTTCTGAATATGATGGTTGTTGTTTCTTGGAAAAGGTAAGTGAAGAGTTAACAAGACATGGAATGGATTCTTTAAAAAATAAACTTTTTTCTAAACTATTGGCAGAAGATGTGAAAATTGATACACCAAATTGGTTGCCTAGTGATATTGAGAGGCGGATTGGCCGCATGAAGGTTCTTATCGTTCTTGATGACGTCAAGGGTACAGATCAGCTGGAAAAATTATTTGGAAGTTGTGATTGGTTTCAATATGATAGTAGAATAATTTTAACAGCCAGAGATAAGCAAGTACTTATTGCTAATGAAGTTGATAAAGATGATCTGTTTGAGGTTGGGGTATTGGGTCCTACTGAAGAACTTGAGCTTTTCAATTTGAATGCCTTTAAACAAAGTGATCTTGAAGTTGATCAGTTTTGTGATGTATCAAAGAGGGTGACCGAATATGCCAAAGGAATTCCATTAGTTCTTAAAGTTTTGGCTAATATGCTTCGTGGAAAAAATAAAGAAGTATGGGAAAGTCAGCTAGACAAACTTAGAAGACTGCCAGTTCAAGAAGTTGATAAAGTAATGAGACTCAGTTATGATGATCTTGATCCTTTAGAGAAGAAGTATTTTTTAGATATTGCATGTTTCTTCAATGGGTTGAGTTTGAGAGTGGGTTACATAACACTTTTATTGAAAGATTCTAACAGTGATAATTCAGTGGCTGCTGGGTTAGAAAGCTTGAAAGACAAAGCTCTTATAACTATTTCTGAATATAATGTTATATCTATGCATGACATTCTACAAGAAATGGGTCGGGAGGTAGTTCGCCAAGAATCTAGAGAACACCCTGAAAAACGCAGTCGATTATGGAATCCTGATGAAATTTATGATGTATTGAAAAATGACAAGGGTACTGATTCTATAAGAAGCATAAGTCTGCGAACAATGAGGAAGCTCGAGTTAAGCCCTCGTGTATTTGATAAGATGACCAAACTTCGATTTTTGTATTTTGGTGATATAGATAGTTTCAATTGTCTTCCTCAAAGGTTTCAATCTTTTCCAACTAATCTAAGATATCTTCATTGGATGTATTGTCCTCTAAAATCATTCCCAGAGAACTTTTCTGCAGAGAATCTTGTTATATTGAACTTGTATGATAGTAAAATGGAAAAGCTTTGGCGTGGAGTGCAGGATCTAATTAATTTAAAAGAAGTTAGATTCACTAATTCAAAATTCTTAAAGGAGTTACCAGACTTTTCAAAAGCCACAAATCTGAAGGCATTTCATATCAAAATCTGTAAAGAGTTGATAAGCGTCCATCCATCTATTTTCTCTCTTAACAGGCTTGAGCAATTGGGTCTATCGTGGTGTCCCATCAATGCACTGCCATCATCTTTTGGATGTCAAAGCAATCTAGAAACCCTGAATTTAAGTTACACTAAAATTGAGAGCATACCTTCAAGCATCAAGGATCTTACAAGACTAAGAAAATTAGACATACAAGGTTGCAAAAAGCTTCTGTCTCTACCCGAGCTTCCTTCATCAGTTGAAACTCTACTTGTTAGCAGCTGTAGATCACTGAAGACTGTATTGTTCCCTTCAACAGTTGCTGAACAATTCAAGGAAAACAAGAAAAGTGTTGAGTTCTGGCATTGCAAGAACTTGGATGAAAGTTCTCTCATAAATGTTGGGTTGAATGTTCAAATCAATTTAATGAAGTATGCTAACTTTGGTTCTGATGAAGCAATGTATGTGTATCCTGGAAGTAATGTTCCAGAGTGGTTTGAGTACAAGACAACAAAGGATGACAAGATTGTTGATCTCTCTCCACCTCACCTCTCCCCCTTGTTGGGCTTTGTTTTTTGCTTTGTTTTTAAAATTATAAAAAGATCACCTATCCATTATTTTACCCAAATGGAATTTAACATCAGTACAATTGATGTTGAGGGTGACGGTGAAAAGGATGGTGTTGATATCTACATGCGTGGGCCATCCCTTCTTAAATCAGATCATGTGAGCATGGTATACGATCAACAATGTTCTCAATTCTTAACTAAAAAAGCAAAAAATCAGGCAAGGTTTAAAATCAAGGTTACAGTAAGGGCAATTGGATTTTCCTGTGATTTAAATCATGTGGAATTAAAAGGGTTTGGCATGAGCCCTATAAACCAGTCAACATATCACAATTTCATTCAACAAATGGAATACGAATGTGCTGAAGGTGAAAGGAACAAAGGAAATAAAAGAAAAAGAAATTTGAGGCGAGAAAAGCCTTAA 2445 0.3546 MRLSKLKNSPVKSKELVGIDKSISHLKSLLKKESQKAPVIGIWGMGGIGKTTIAKELFDQICSEYDGCCFLEKVSEELTRHGMDSLKNKLFSKLLAEDVKIDTPNWLPSDIERRIGRMKVLIVLDDVKGTDQLEKLFGSCDWFQYDSRIILTARDKQVLIANEVDKDDLFEVGVLGPTEELELFNLNAFKQSDLEVDQFCDVSKRVTEYAKGIPLVLKVLANMLRGKNKEVWESQLDKLRRLPVQEVDKVMRLSYDDLDPLEKKYFLDIACFFNGLSLRVGYITLLLKDSNSDNSVAAGLESLKDKALITISEYNVISMHDILQEMGREVVRQESREHPEKRSRLWNPDEIYDVLKNDKGTDSIRSISLRTMRKLELSPRVFDKMTKLRFLYFGDIDSFNCLPQRFQSFPTNLRYLHWMYCPLKSFPENFSAENLVILNLYDSKMEKLWRGVQDLINLKEVRFTNSKFLKELPDFSKATNLKAFHIKICKELISVHPSIFSLNRLEQLGLSWCPINALPSSFGCQSNLETLNLSYTKIESIPSSIKDLTRLRKLDIQGCKKLLSLPELPSSVETLLVSSCRSLKTVLFPSTVAEQFKENKKSVEFWHCKNLDESSLINVGLNVQINLMKYANFGSDEAMYVYPGSNVPEWFEYKTTKDDKIVDLSPPHLSPLLGFVFCFVFKIIKRSPIHYFTQMEFNISTIDVEGDGEKDGVDIYMRGPSLLKSDHVSMVYDQQCSQFLTKKAKNQARFKIKVTVRAIGFSCDLNHVELKGFGMSPINQSTYHNFIQQMEYECAEGERNKGNKRKRNLRREKP* 815
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0334 814 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 7 269 IPR027417 -
Mtr4g0334 814 Pfam C-JID domain 642 774 IPR045344 -
Mtr4g0334 814 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 507 807 IPR044974 GO:0006952
Mtr4g0334 814 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 4 513 IPR044974 GO:0006952
Mtr4g0334 814 Coils Coil 792 812 - -
Mtr4g0334 814 Pfam NB-ARC domain 27 256 IPR002182 GO:0043531
Mtr4g0334 814 SUPERFAMILY L domain-like 365 620 - -
Mtr4g0334 814 Gene3D - 2 167 IPR027417 -
Mtr4g0334 814 SUPERFAMILY "Winged helix" DNA-binding domain 246 356 IPR036390 -
Mtr4g0334 814 Pfam Leucine Rich Repeat 434 453 IPR011713 -
Mtr4g0334 814 Gene3D Ribonuclease Inhibitor 350 635 IPR032675 -
Mtr4g0334 814 ProSiteProfiles Leucine-rich repeat profile. 527 548 IPR001611 GO:0005515
Mtr4g0334 814 PRINTS Disease resistance protein signature 39 54 - -
Mtr4g0334 814 PRINTS Disease resistance protein signature 114 128 - -
Mtr4g0334 814 PRINTS Disease resistance protein signature 210 224 - -
Mtr4g0334 814 PRINTS Disease resistance protein signature 546 562 - -
Mtr4g0334 814 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 4 513 - -
Mtr4g0334 814 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 507 807 - -
Mtr4g0334 814 Pfam Leucine Rich repeats (2 copies) 527 569 IPR025875 -
Mtr4g0334 814 Gene3D - 175 259 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0334 Mtr-Chr4 4011787 4014501 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g0334 16 591 WRKY Transcription Factor Family AT4G12020 33.712 6.92e-81 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0334 - - mtr:MTR_4g014160 889.412