Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0322 ATGGGAAATTTTTGCAGCTGCCAAGTTTCAATTATAGGCAAGGTACATGATGTGGAATATGATGAATGTGACCAAAAGGACATTGATTTTACAAGTGAAAATGGTGGGTCACAGGTCATGTTTAAAGGATCCTCTAAATCTATATCAATGTACTGCAAAAAGGGTACAAAAGGAATTAATCAAGATGCAATCACAGTTTGGGAGGACTTTGGCGGAGAAAAAGACACAATTTTTTGTGGTGTGTTCGATGGTCATGGTCCTCTAGGACACAAATTTGCACAATGTATACGTGACAATCTACCTTCTAAACTCTCTACAACAATCAAAATGTCACAACAAAATGTCGATGGTGCTAATGCTACAAACAAAAACACTTATGATGAGGATAAACAACACTTGTCCTGTACTTCATGGGAAAAACACCTTTTCAGCTCCTTCAATGAGATGGATGAAGATCTTGCTAAGAACATTGCCAAAACTGATGGATTTTGTGGAGGTAGTGTAGCTGTAACTTTAATTAAACAGGGTGACCAATTGATAATTGGCAATTTGGGCGATTCTCGTGCAGTACTTTGCACAAAAGCAGACGACAACCATCTTATTCCTATTCAACTATCTACCGACTTGGTTCCGGATGTTCCAAATGAAGCTAAGAGAGTGATTAATTGTGGAGGAAGAGTTTTTGCAGCAAAAGAAGATCCTGATGTAAAAAGAATTTGGATGGCTGAAGGTGATTGTCCTGGATTAGCTATGTCAAGAGCATTTGGAGATTTTTGCCTTAAAGAATATGGTCTCTCTTCAGTTCCTGATGTATCTCATAGAAAAATTACTAAGCAAGATGAGTTTGTTGTTTTGGCCAGTGATGGGGTATGGAATGCGCTATCAAATATTGAAGTAATAACCATAGTTGCATCAGCACCAAAGAGGTCCTTAGCAGCCAAATTGTTAGTCAAACGTGCTGTTCAAGCTTGGAAACAAAAGAATCCTTGTTATCATGTTGATGATTGTTCAGCCATATGCTTGTTCTTGAATGATCAGCCAGTTAATCTGAGAGGGAATAAAAGACATCGCTAG 1074 0.3818 MGNFCSCQVSIIGKVHDVEYDECDQKDIDFTSENGGSQVMFKGSSKSISMYCKKGTKGINQDAITVWEDFGGEKDTIFCGVFDGHGPLGHKFAQCIRDNLPSKLSTTIKMSQQNVDGANATNKNTYDEDKQHLSCTSWEKHLFSSFNEMDEDLAKNIAKTDGFCGGSVAVTLIKQGDQLIIGNLGDSRAVLCTKADDNHLIPIQLSTDLVPDVPNEAKRVINCGGRVFAAKEDPDVKRIWMAEGDCPGLAMSRAFGDFCLKEYGLSSVPDVSHRKITKQDEFVVLASDGVWNALSNIEVITIVASAPKRSLAAKLLVKRAVQAWKQKNPCYHVDDCSAICLFLNDQPVNLRGNKRHR* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0322 357 ProSiteProfiles PPM-type phosphatase domain profile. 47 343 IPR001932 -
Mtr4g0322 357 CDD PP2Cc 47 343 IPR001932 -
Mtr4g0322 357 PANTHER PROTEIN PHOSPHATASE 2C 65-RELATED 1 353 - -
Mtr4g0322 357 SMART PP2C_4 40 341 IPR001932 -
Mtr4g0322 357 Pfam Protein phosphatase 2C 71 322 IPR001932 -
Mtr4g0322 357 Gene3D - 36 345 IPR036457 -
Mtr4g0322 357 PANTHER ALPHABET, ISOFORM E-RELATED 1 353 - -
Mtr4g0322 357 SUPERFAMILY PP2C-like 43 345 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0322 Mtr-Chr4 3903571 3906283 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g0322 1 353 PP2C-type Phosphatase Gene Family AT5G01700 48.159 1.44e-115 338
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0322 - - cam:101501265 531.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g0322 4 3903571 3906283 Mtr4g0322 4 3903571 3906283 ECH
Mtr7g1721 7 32808048 32811251 Mtr4g0322 4 3903571 3906283 PCT