Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0319 ATGTCTTTTAGTTTCAACAATCACTTTTCCAACACCAACAATAACATCACCACCTTGGATATTACTAAATTTGTTGAAACTTCTTCTCTAAAAACTCATGATGATGATCATTTTGCACTTGATGATGTAATTTACCCTTCTTATTCTGATTTTCCACCTGGGTTCAGCCCATCAGAGTTATTGAATTCACCTTCCTTTCTTTCTTCTTCTAATATTCCTTCATCTTATACAAATGAGCCTTCAACTGTCCAAAGCATGAACCAACAGCATAGCAAGGAATTAGAAGAGAGAAACTTCTCTGAGCCCTCTTTCCAAACACAAAAACAGACCATGCATGATCTCTTTCAATCTTCCACAAGTATGTTTCAAGTGGAGGAACCACTAAAGACACATGACACATTGATATTCAATGAATCTACAAAGCAAACAAATTTTTCATTTGAAGGAACAACAAAACATGAAGCACAAACTAACTCTTCAGTTCCTAATTCTAGTTATTTTAACAACACTAGTGCTTCTATGTCTATAAGAGAACAAAGAAAATCAGAAGAAGATGGATACAAGTGGAGAAAATATGGAGAGAAACAAGTGAAAGGAAGTGAAAATCCAAGAAGTTATTACAAGTGCACTAATCCAATTTGCTCAATGAAGAAGAAAGTTGAAAGGTCTTTGGATGATGGACAAATTACTCAAATAGTATATAAAGGAAGTCATAACCATCCTAAGCCTCAGTGTACAAAGAGAAGAGCAAATTCTCAATATATTCATCAACCTTCTTCATCATGCAACAACTCTATGGTCTCTGATCTTTCTTTGGGAGAGGATGATTTTGATCAAACATCACAAACTAGTTTTTCTGGTGGAGATTATGATGACTTGGGAATAGAGGCTAAAAGATGGAAAGGAGAGAATGAAAATGATAGCTATTCTTACTCCACAGAAGGGTGTAGAACTGTTAAGGAACCAAGAGTTGTGGTTCAAACTACAAGTGAAATTGATATTCTTGATGATGGATATAGGTGGAGGAAATATGGACAGAAAGTAGTTAAAGGAAATCCAAACCCAAGGAGCTACTACAAATGTGTAATCCAAGGTTGTACTGTGAGAAAACATGTTGAGAGAGCAGCACATGATATTAAAGCAGTAATCACAACATATGAAGGGAAACATAACCATGATGTACCTCTAGGAAGAGGAATTTCAAGCAGTAGCATAAACAGTACTTCTCTTAACAACAATACATGTAATGTTACACCTATAAGGCCTTCAGCAGTGACTAATTATTCTAGCTTAGCAAATTTTACAAATTCACTTCATGATTCAAAGCTACCAACTTCTGAAAATCAAGAACATTTTCAGCTGGACATGTTGATGAATTCTAGAAGCTTTTTGGACAGATCAATTGGTTCAAATACCAATTCTGAACAATACGCAACTAAGGATGACTCATTCCTTCAATCTTTTGTATTGAAGAACATTTAA 1482 0.3489 MSFSFNNHFSNTNNNITTLDITKFVETSSLKTHDDDHFALDDVIYPSYSDFPPGFSPSELLNSPSFLSSSNIPSSYTNEPSTVQSMNQQHSKELEERNFSEPSFQTQKQTMHDLFQSSTSMFQVEEPLKTHDTLIFNESTKQTNFSFEGTTKHEAQTNSSVPNSSYFNNTSASMSIREQRKSEEDGYKWRKYGEKQVKGSENPRSYYKCTNPICSMKKKVERSLDDGQITQIVYKGSHNHPKPQCTKRRANSQYIHQPSSSCNNSMVSDLSLGEDDFDQTSQTSFSGGDYDDLGIEAKRWKGENENDSYSYSTEGCRTVKEPRVVVQTTSEIDILDDGYRWRKYGQKVVKGNPNPRSYYKCVIQGCTVRKHVERAAHDIKAVITTYEGKHNHDVPLGRGISSSSINSTSLNNNTCNVTPIRPSAVTNYSSLANFTNSLHDSKLPTSENQEHFQLDMLMNSRSFLDRSIGSNTNSEQYATKDDSFLQSFVLKNI* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0319 493 SMART WRKY_cls 335 394 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr4g0319 493 SMART WRKY_cls 183 242 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr4g0319 493 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 41 491 IPR044810 GO:0003700
Mtr4g0319 493 ProSiteProfiles WRKY domain profile. 330 395 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr4g0319 493 Gene3D WRKY domain 168 244 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mtr4g0319 493 Gene3D WRKY domain 319 396 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mtr4g0319 493 SUPERFAMILY WRKY DNA-binding domain 180 243 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mtr4g0319 493 Pfam WRKY DNA -binding domain 184 241 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr4g0319 493 Pfam WRKY DNA -binding domain 336 392 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr4g0319 493 MobiDBLite consensus disorder prediction 152 176 - -
Mtr4g0319 493 MobiDBLite consensus disorder prediction 70 95 - -
Mtr4g0319 493 ProSiteProfiles WRKY domain profile. 184 243 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr4g0319 493 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 41 491 - -
Mtr4g0319 493 MobiDBLite consensus disorder prediction 152 187 - -
Mtr4g0319 493 SUPERFAMILY WRKY DNA-binding domain 327 395 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mtr4g0319 493 MobiDBLite consensus disorder prediction 70 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0319 Mtr-Chr4 3867070 3870094 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g0319 55 459 WRKY Transcription Factor Family AT2G38470 45.598 1.44e-96 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mtr4g0319 WRKY 3.6e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0319 K13424 - gmx:100127367 553.132
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g0319 4 3867070 3870094 Mtr4g0319 4 3867070 3870094 ECH
Mtr7g1737 7 33027576 33030854 Mtr4g0319 4 3867070 3870094 PCT