LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mtr4g0293	ATGGCACCACCATTGATACTACCAAAATTAATTCTTCTGATTCTTGTGTTATGTCTTTTATTTCAACACAAAAATCACAACAAGAACACCAATTCTAACGCCAACACATTCAACTCCATCAACATTGTTCCAATACATTCTTTTTCAAGTTTCCCAGTTTCTTTATCTGCCATCAACAACAGCCATGTATCAGAATCATCTTCTTCTGATTCTTCTTCCAACTTTCTTCTTGAATATGATTTCTACCGTGATTCATGTCCTCATGCTGAGCACATTGTTCGTTCTACGCTTCACCTGCTTTACAAAACTAATCCTGCTTTGGTTCCTGCTCTTATTCGTCTTGTTTTTCATGATTGCTTCATTCAGGGATGTGATGCTTCTATTTTGTTGGATAATGATGAATACATTGATTCAGAGAAAGATTCCTCCAATGATAGCCTCAAAGGATTTGATGTAATCGAGACCATTAAAGCCAAGCTTGAAGAAGCATGTCCTGGAGTTGTTTCTTGTGCTGATATTCTTGTACTTGCTGCAAGAGATTCTGTTGTTCTGGCCGGTGGTCCATTCTATCCTTTGAATCCAGGAAGGAGGGATGGTTCGAACTCTTTTGCTGACATAGCAACAGATGAGCTTCCTTCACCCTATGCAGATTTAACTCAAACTCGTGCATCCTTCAAATCAAGGGGATTTGATGAAAGAGAAATGGTCACTCTCTTAGGTGCCCACAGCATTGGTGTAATCCCCTGTAAATTCTTCGAAAACTGTCTCTATAACTTCAGTGGAACTAATGAACCTGACCCTTCTTTGGATACTCAATTTCTAAATGTACTAAGATCAAAATGCAATGAAACTGATGCATTATCCACTTCAGCATCAGCATATTCATCACATGCCTCACCTTCTTCCTTAGTTGAAGAGCAACAAGAAATCACTACGGACTCCGGGGAATCTCTATCGAATTTCGGGACGTTATACTACCGCAGACTATTACAAGGTAAAGGAATCCTCTATGAAGATCAGCAGCTGATGGAAGGGGAAAAAACCAGATATTGGGTTCAATACGCATCTAATCGTACTTTGTTCCATCAAGATTTTGCCCTTGCAATGATGAAACTCTCCGATCTCCGAGTTTTGACAAAGCCTATGGGACAGATTCGGTGCAGTTGTTCAAAAGTTTAG	1179	0.3961	MAPPLILPKLILLILVLCLLFQHKNHNKNTNSNANTFNSINIVPIHSFSSFPVSLSAINNSHVSESSSSDSSSNFLLEYDFYRDSCPHAEHIVRSTLHLLYKTNPALVPALIRLVFHDCFIQGCDASILLDNDEYIDSEKDSSNDSLKGFDVIETIKAKLEEACPGVVSCADILVLAARDSVVLAGGPFYPLNPGRRDGSNSFADIATDELPSPYADLTQTRASFKSRGFDEREMVTLLGAHSIGVIPCKFFENCLYNFSGTNEPDPSLDTQFLNVLRSKCNETDALSTSASAYSSHASPSSLVEEQQEITTDSGESLSNFGTLYYRRLLQGKGILYEDQQLMEGEKTRYWVQYASNRTLFHQDFALAMMKLSDLRVLTKPMGQIRCSCSKV*	393

Annotation information

Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Mtr4g0293	392	ProSitePatterns	Peroxidases active site signature.	108	119	IPR019794	GO:0004601
Mtr4g0293	392	SUPERFAMILY	Heme-dependent peroxidases	77	392	IPR010255	GO:0004601\|GO:0006979\|GO:0020037
Mtr4g0293	392	Gene3D	-	80	391	-	-
Mtr4g0293	392	CDD	secretory_peroxidase	77	392	IPR033905	GO:0004601\|GO:0042744
Mtr4g0293	392	Pfam	Peroxidase	93	355	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
Mtr4g0293	392	PANTHER	PEROXIDASE 48-RELATED	66	387	-	-
Mtr4g0293	392	PRINTS	Plant peroxidase signature	367	380	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
Mtr4g0293	392	PRINTS	Plant peroxidase signature	233	245	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
Mtr4g0293	392	PRINTS	Plant peroxidase signature	148	161	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
Mtr4g0293	392	PRINTS	Plant peroxidase signature	86	105	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
Mtr4g0293	392	PRINTS	Plant peroxidase signature	110	130	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
Mtr4g0293	392	PRINTS	Plant peroxidase signature	167	177	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
Mtr4g0293	392	PRINTS	Plant peroxidase signature	328	345	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
Mtr4g0293	392	PRINTS	Plant peroxidase signature	186	201	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
Mtr4g0293	392	Gene3D	Peroxidase, domain 2	212	372	-	-
Mtr4g0293	392	ProSiteProfiles	Plant heme peroxidase family profile.	76	392	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
Mtr4g0293	392	PANTHER	PEROXIDASE 25-RELATED	66	387	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
Mtr4g0293	392	PRINTS	Haem peroxidase superfamily signature	108	122	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
Mtr4g0293	392	PRINTS	Haem peroxidase superfamily signature	234	249	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
Mtr4g0293	392	PRINTS	Haem peroxidase superfamily signature	186	198	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
Mtr4g0293	392	PRINTS	Haem peroxidase superfamily signature	168	185	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
Mtr4g0293	392	ProSitePatterns	Peroxidases proximal heme-ligand signature.	234	244	IPR019793	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mtr4g0293	Mtr-Chr4	3618100	3620801	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mtr4g0293	77	392	Peroxidase	AT4G33870	50.450	6.41e-113	334

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mtr4g0293	K00430		-	tcc:18595928	387.111

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Mtr4g0293	4	3618100	3620801	Mtr4g0293	4	3618100	3620801	ECH