Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0291 ATGGATTTCTGGCCAGAGTTTCTTGCAAGTAGTTCAGGTAGAGAATTTGTGGCTGGTGGATTTGGAGGCACAGCTGGTGTAATCTCTGGTTATCCTTTGGATACACTTAGAATCAGACAACAAAGTGGTGGCCAAAATGGTTCTGCTTTTAACATCCTTAGACAAATGTTGTCTAAAGAAGGTTTTTGTTCTTTGTACCGTGGCATGGGTGCACCATTGGCATCAGTTACTTTTCAGAATGCTGTGGTTTTTCAAACATATGCAGTTCTGTCAAGGGCATTTGACCCATCTGCTTCTGCTAAAGATCCTCCATCCTACAAGAGTGTTGCATTAGGCGGAATGGGCACAGGAGGTCTTCAAAGTTTATTGCTTTCACCAGTGGAGTTGATCAAAATTCGACTTCAGCTGCAAAACACAAACCAGTCAAAAGAATCTGGAACAACTCCTGTAAAAGTAGCTAAAAACATATGGAGAAAAGAGGGTTTGCGCGGCATATATCGAGGGCTTGGTATCACTATAATGAGGGATATTCCTTCTCATGGTTTTTACTTCTGGACATATGAATACATGAGGGAAAAATTGCATCCAGGTTGTAGAAAAAGTGGTCAAGAAAGTTTGAATACTATGTTGGTGTCTGGAGGATTAGCGGGGGTAGCGAGCTGGGTCTGCAGTTACCCTTTTGATGTTGTGAAGACGAGACTACAAGCTCAAACGCCTTCTGCTATAAAATACAAAGGCGTTTATGATTGCATCACGAAAAGCGTTAGAGAAGAAGGATACCCTGTGCTGTGGCGTGGTTTAGGAACTGCGGTTGCCAGAGCATTTGTTGTGAATGGTGCTGTATTTGCTGCTTATGAGTTTGCACTGCGTTTTCTGTTTAACAATGAAAACGTTCAAATGCAGGAAACAATTTAG 915 0.4208 MDFWPEFLASSSGREFVAGGFGGTAGVISGYPLDTLRIRQQSGGQNGSAFNILRQMLSKEGFCSLYRGMGAPLASVTFQNAVVFQTYAVLSRAFDPSASAKDPPSYKSVALGGMGTGGLQSLLLSPVELIKIRLQLQNTNQSKESGTTPVKVAKNIWRKEGLRGIYRGLGITIMRDIPSHGFYFWTYEYMREKLHPGCRKSGQESLNTMLVSGGLAGVASWVCSYPFDVVKTRLQAQTPSAIKYKGVYDCITKSVREEGYPVLWRGLGTAVARAFVVNGAVFAAYEFALRFLFNNENVQMQETI* 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0291 304 PRINTS Mitochondrial carrier protein signature 15 28 IPR002067 GO:0055085
Mtr4g0291 304 PRINTS Mitochondrial carrier protein signature 119 137 IPR002067 GO:0055085
Mtr4g0291 304 PRINTS Mitochondrial carrier protein signature 166 184 IPR002067 GO:0055085
Mtr4g0291 304 PRINTS Mitochondrial carrier protein signature 213 235 IPR002067 GO:0055085
Mtr4g0291 304 ProSiteProfiles Solute carrier (Solcar) repeat profile. 204 291 IPR018108 -
Mtr4g0291 304 ProSiteProfiles Solute carrier (Solcar) repeat profile. 104 193 IPR018108 -
Mtr4g0291 304 ProSiteProfiles Solute carrier (Solcar) repeat profile. 10 93 IPR018108 -
Mtr4g0291 304 Pfam Mitochondrial carrier protein 110 194 IPR018108 -
Mtr4g0291 304 Pfam Mitochondrial carrier protein 208 295 IPR018108 -
Mtr4g0291 304 Pfam Mitochondrial carrier protein 12 94 IPR018108 -
Mtr4g0291 304 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 1 294 - -
Mtr4g0291 304 SUPERFAMILY Mitochondrial carrier 14 287 IPR023395 -
Mtr4g0291 304 Gene3D Mitochondrial carrier domain 9 303 IPR023395 -
Mtr4g0291 304 PANTHER CARNITINE/ACYLCARNITINE CARRIER-LIKE PROTEIN 1 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0291 Mtr-Chr4 3611343 3614220 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g0291 1 295 Antiporters AT1G79900 70.508 7.73e-142 400
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0291 K15109 - gmx:100812056 489.574
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g0291 4 3611343 3614220 Mtr4g0291 4 3611343 3614220 ECH