Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0279 ATGCCAAAGAACTTTCAAAAATCCCTTCAAAATTACCTCTCCAAAATCAAAACCAATCGCCCAAGACAGCTTCGTATATCCTCTAAGAAATGGATTGGTCTCAAAGGTTGCAAGCATCCTAGAACTCCTTCTCTCTCTTTCGACAAGAAAAACAACGACAACAAGGACGATGAAGCCACACTAGAAGACGTTGACCGTTTTCTCTTCGAGAATTTCAAGTCTTTATACCTCGAAGATGACAAAGAAGCCGATTGTAACAACAACACTAAAAGTGTTGTCTCATCAGACGAAGAAGAAGATGATGAAGAAGAAGAGGAAACCCGTGAAGAAAAATATTCAAAACAAGGTCCCACCTTGTTCGATTCATCCAATGAGACACCACTAGATCTATGTGGATCTAACAGATTCGTTTTGACACGTGGTTTCTCAGGCTCCACGACAACAACAACAAACACATTTGAAGAAACAGGATCGTGCTCAAACTCGTCAACACCAAAAACCTTCAATGTTAATTCATTTTCAAAGGAGGATCAAATGAATATTCCTGATAATTGTGTTGTTGTGTTGGCGAGTTCGCCAAGTCCTTATGATGATTTTCGAAGATCCATGCAAGAAACGGTGGAAGCAAGGTTGAGGAACAATGAAAGTGTTGATTGGGATTTTATGGAAGAGCTTTTGTTTTGTTATATGAACTTAAATGAGAAGAAATCTTATAAGTTTATACTAAGTGCTTTTTGTGACTTGATCTCTATCATGAGGAAGAGTTCGGAGACTAAACCAGAGAAGCCGCGGAGCGTTCGGACTGTTAGGATTGGGACTGAGGTAAGGAAGAAGAAGATTAAAGAATTAACTTTAGAGTTTGAAGGTTCAAGATAA 876 0.3881 MPKNFQKSLQNYLSKIKTNRPRQLRISSKKWIGLKGCKHPRTPSLSFDKKNNDNKDDEATLEDVDRFLFENFKSLYLEDDKEADCNNNTKSVVSSDEEEDDEEEEETREEKYSKQGPTLFDSSNETPLDLCGSNRFVLTRGFSGSTTTTTNTFEETGSCSNSSTPKTFNVNSFSKEDQMNIPDNCVVVLASSPSPYDDFRRSMQETVEARLRNNESVDWDFMEELLFCYMNLNEKKSYKFILSAFCDLISIMRKSSETKPEKPRSVRTVRIGTEVRKKKIKELTLEFEGSR* 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0279 291 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 186 252 IPR006458 -
Mtr4g0279 291 PANTHER OVATE TRANSCRIPTIONAL REPRESSOR 3 273 - -
Mtr4g0279 291 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 3 273 IPR038933 GO:0045892
Mtr4g0279 291 MobiDBLite consensus disorder prediction 86 125 - -
Mtr4g0279 291 Pfam Transcriptional repressor, ovate 192 250 IPR006458 -
Mtr4g0279 291 ProSiteProfiles OVATE domain profile. 188 251 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0279 Mtr-Chr4 3402277 3403462 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Mtr4g0279 Ovate 1.1e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0279 - - mtr:MTR_4g012060 525.783
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g0279 4 3402277 3403462 Mtr4g0279 4 3402277 3403462 ECH
Mtr2g3612 2 50066035 50067282 Mtr4g0279 4 3402277 3403462 PCT