Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0278 ATGAGTGTGGTGGGATTTGATTTTGGTAACGAGAGTTGCATTGTTGCTGTTGCTAGACAAAGAGGGATTGATGTTGTGTTAAACGATGAATCTAAGCGTGAAACACCGGCGATTGTGTGTTTCGGTGAAAAACAGCGGTTTATTGGTACTGCTGGTGCTGCTTCAACCATGATGAATCCTAAGAATTCAATTTCACAGATTAAGAGACTTATTGGGAAATTGTATTCGGATCCGGATTTGCAGCGTGATCTTAAGTCGTTGCCTTTTAGTGTGGCTGAGGGGCCGGATGGGTATCCATTGATTCAGGCGCGTTATTTGGGGGAGGTTAAGATGTTTACCCCGACACAAGTGTTTGCGATGATGTTGGGGAATATGAAGGAGATAGCTGAGAAGAATCTTAATGCTGCGGTTAATGATTGTTGTATTGGGATTCCGTGTTATTTTACTGATCTACAGAGAAGGGCTGTGTTGGATGCTGCAACTATTGCTGGTTTGCATCCGCTTCGGTTGCTTCATGAAACTACTGCAACTGCATTGGCGTATGGGATTTATAAGACAGATCTGCCAGAGAATGATCAGCTGAATGTAGCTTTTGTGGATATTGGACATGCTAGTATGCAGGTGTGTATTGCTGGATTTAAAAAGGGGCAGCTGAAAGTGTTGGCTCATTCGTTCGATAGGTCTCTTGGTGGTAGGGATTTTGATGAGGTTTTGTTTCATCACTTTGCTGGAAAGTTTAAGGAGGAGTACAAAATTGATGTGCTTTCGAATGCCAGGGCTTGTTTGAGGCTTAGGGCTGCTTGTGAGAAGATGAAGAAGATGCTCAGTGCAAATCCTGTGGTGCCCCTAAACATCGAGTGCTTGATGGATGAGAAGGATGTAAAGGGTATAATGAAGCGTGATGAGTTTGAGGAACTGAGTCTCCCGATTTTGGAGCGTGTTAAGGGACCTTTGGAGAGGGCACTTGCTGAAGCAGGACTCTCAGTTGATGATATACATATGGTGGAGGTCGTTGGTTCCGGCTCTCGTGTACCTGCTATAAACAAGATCTTGACGGAGTTTTTCAAGAAGGAGCCTAGGCGAACAATGAACGCCAGTGAATGTGTTGCTAAAGGTGCTGCATTGCAATGTGCTATTCTTAGCCCAACGTTTAAAGTGCGAGAATTTCAGGTCAATGAAAGCTTTCCTTTCTCGATCTCTCTTGCGTGGAAAGGTTCTGGTCCAGATGCACAGGATAGTGGACCCGACAATCAGCAGAGTTCCCTTGTTTTTCCAAAGGGTAATCCCATACCAAGTATCAAGGCACTGACATTCTACAGGTCAGGAACATTTTCCATTGATGCACAATACAGTGATGTGAATGGGCAGCAAACACCTGCTAGGATCAGCACATATACCATTGGTCCTTTCGAAGCGAAACAAAGCGAAAAGGCAAAAGTTAAAGTGAAAGTTCGTTTGAATGTGCATGGAATTGCATCTGTTGACTTGGCAACTGTCTTGGAAGAGGAAGAAGTTGAGGCTTCAGTTTCCAAAGAATCAGCTAAAGAGCCTACTAAGATGGAGGCTGATGAAGCTCCTGCTGATCCTGCTGCACCTCCCAATGGCAACGATGCCGATGTTAATATGCAAGATGCAAAGGCCAATGCTGATACCCCTGGGGTTGAAAATGGCGTCCCTGAGACTGGAGATAAGCCTGCACAAATGGATGTTGATGATACCAAGGCTCCAAAGAAAAAGGTTAAGAAAACAAATGTTCCTGTAGCAGAGTTGGTTTATGGAGCAATGGCACCTGTGGATGTCCAGAAAGCTGTAGAGAAGGAGTATGAAATGGCTTTGCAAGATCGCGTGATGGAAGAAACAAAGGACAAGAAAAATGCAGTAGAGGCTTATGTTTATGACATGAGAAACAAGCTTAATGACAAATACCAAGAGTTTGTCATTGCTTCTGAGAGGGAAGGTCTTACCGCAAAACTTCAGGAGGTGGAAGATTGGCTATATGAGGATGGTGAAGACGAAACTAAAGGTGTATATGTTGCCAAACTTGAAGAGCTCAAAAAGCAAGGCGACCCGATCGAAGAGCGTTACAAAGAGTACGAGGAGAGGGGCACAATAATTGAACAGTTCAACTATTGTATAGGCAGTTACAGAGAAGCTGCAATGTCAACTGATACCAAATTTGATCACATTGACATTAACGAGAAACAAAAGGTCTTGAATGAATGTGTTGAAGCTGAGAACTGGCTCCGGGAGAAGAAGCAGCAGCAGGACTCGCTTCCAAAACATGCCAACCCTGTACTCTTGGTAGCTGAAATAAGAAAGAAAGCTGAGGCTATTGATAGGTTCTGCAAGCCGATTATGACAAAACCAAAGCCAGCCAAGCCAGCTGCTCCACAAACACCACCAAGCCCAGCTTCTTCAGGTTCTGAGCAGCAGCAACCTCAGGCAGATGCGAATGCCAGTGCCAGTGAAAATGCTGGTGATAGTGAAAATCAGGCTTCATCAGCATCCACCGAACCAATGGAAACTGATAAGCCAGAGAATACAAGTTCTGCCTAA 2556 0.4448 MSVVGFDFGNESCIVAVARQRGIDVVLNDESKRETPAIVCFGEKQRFIGTAGAASTMMNPKNSISQIKRLIGKLYSDPDLQRDLKSLPFSVAEGPDGYPLIQARYLGEVKMFTPTQVFAMMLGNMKEIAEKNLNAAVNDCCIGIPCYFTDLQRRAVLDAATIAGLHPLRLLHETTATALAYGIYKTDLPENDQLNVAFVDIGHASMQVCIAGFKKGQLKVLAHSFDRSLGGRDFDEVLFHHFAGKFKEEYKIDVLSNARACLRLRAACEKMKKMLSANPVVPLNIECLMDEKDVKGIMKRDEFEELSLPILERVKGPLERALAEAGLSVDDIHMVEVVGSGSRVPAINKILTEFFKKEPRRTMNASECVAKGAALQCAILSPTFKVREFQVNESFPFSISLAWKGSGPDAQDSGPDNQQSSLVFPKGNPIPSIKALTFYRSGTFSIDAQYSDVNGQQTPARISTYTIGPFEAKQSEKAKVKVKVRLNVHGIASVDLATVLEEEEVEASVSKESAKEPTKMEADEAPADPAAPPNGNDADVNMQDAKANADTPGVENGVPETGDKPAQMDVDDTKAPKKKVKKTNVPVAELVYGAMAPVDVQKAVEKEYEMALQDRVMEETKDKKNAVEAYVYDMRNKLNDKYQEFVIASEREGLTAKLQEVEDWLYEDGEDETKGVYVAKLEELKKQGDPIEERYKEYEERGTIIEQFNYCIGSYREAAMSTDTKFDHIDINEKQKVLNECVEAENWLREKKQQQDSLPKHANPVLLVAEIRKKAEAIDRFCKPIMTKPKPAKPAAPQTPPSPASSGSEQQQPQADANASASENAGDSENQASSASTEPMETDKPENTSSA* 852
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0278 851 MobiDBLite consensus disorder prediction 782 851 - -
Mtr4g0278 851 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 597 695 IPR029048 -
Mtr4g0278 851 MobiDBLite consensus disorder prediction 802 851 - -
Mtr4g0278 851 CDD HSPA4_like_NDB 2 381 - -
Mtr4g0278 851 MobiDBLite consensus disorder prediction 507 578 - -
Mtr4g0278 851 Gene3D - 186 360 - -
Mtr4g0278 851 Coils Coil 681 701 - -
Mtr4g0278 851 Pfam Hsp70 protein 3 696 IPR013126 GO:0005524|GO:0140662
Mtr4g0278 851 MobiDBLite consensus disorder prediction 411 426 - -
Mtr4g0278 851 Gene3D Actin; Chain A, domain 4 230 313 - -
Mtr4g0278 851 Gene3D - 597 705 IPR029048 -
Mtr4g0278 851 SUPERFAMILY Actin-like ATPase domain 1 185 IPR043129 -
Mtr4g0278 851 Gene3D - 38 113 - -
Mtr4g0278 851 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 718 796 IPR029048 -
Mtr4g0278 851 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 387 592 IPR029047 -
Mtr4g0278 851 PRINTS 70kDa heat shock protein signature 2 15 - -
Mtr4g0278 851 PRINTS 70kDa heat shock protein signature 30 42 - -
Mtr4g0278 851 PRINTS 70kDa heat shock protein signature 140 160 - -
Mtr4g0278 851 PRINTS 70kDa heat shock protein signature 332 348 - -
Mtr4g0278 851 PRINTS 70kDa heat shock protein signature 363 383 - -
Mtr4g0278 851 Gene3D - 5 374 - -
Mtr4g0278 851 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 384 628 IPR029047 -
Mtr4g0278 851 PANTHER HSC70CB, ISOFORM G-RELATED 1 850 - -
Mtr4g0278 851 SUPERFAMILY Actin-like ATPase domain 195 380 IPR043129 -
Mtr4g0278 851 PANTHER HEAT SHOCK 70 KDA PROTEIN 14 1 850 - -
Mtr4g0278 851 MobiDBLite consensus disorder prediction 507 523 - -
Mtr4g0278 851 MobiDBLite consensus disorder prediction 406 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0278 Mtr-Chr4 3391679 3397086 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g0278 4 691 Calmodulin-binding Proteins AT1G16030 28.305 4.31e-87 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0278 K09489 - gmx:100778196 1332.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g0278 4 3391679 3397086 Mtr4g0278 4 3391679 3397086 ECH
Mtr2g3614 2 50082774 50089240 Mtr4g0278 4 3391679 3397086 PCT