Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0273 ATGATTGGAAATGGTGGCACTATATCCCAAGGTTCTGTTTTGTGTTACGCTTGTCAAATTCCTGCTAAGGTTTCTGTCTCAAGTTTCCGAAGTTTTTGGGGACATAGTGTAGAGATTAAACCAAGAGGAATGGCTTACACAGACATGTCTTCTGCATCAAGCCTACTTTTAAGTGGGGGTCAAAATCTTCTATCTCGTACTATCCCTGTGTTACCTTCGCTGCGCAAGTCTTGTAGGGCCCCTCGAGCAATGAAGGAAGGCTCATCTGCTGGCTTTAAGTTTCCTCCGATGACCAGAAAACCAAGATGGTGGTGGAGAACATTAGCATGCATCCCTTATCTCTTGCCTATCCATCAGGTGTGGATGTATGCTAAGACAGCATACAATCTTCACCCGTTTATCGAGGCATTCGAGTTCATAACGTACCCTTTTTTTATGTCAATTGGCAGTCTACCTAGATGGTCTCTCATAGCATACTTCTTGATTGCGTATATTACCATTGTGAGGAGAAAAGAATGGCCTCATTTCTTCAGATTTCACGTTGCCGTCGGAATGTTAATCGAGATAGCCTTGCAAGTTACCGGGCTTGTGAGCCGTTGGATGCCACCGGCATTCTATTGGGGTAGTCTTGGAATGCATTTCTGGACCACTGCATTTTTCCTTTATCTCTTTACTTCCATAGAGTGCGTTAGGTGTGCCCTTACTGGTATGTATGCGGATATCCCTTTTGTCTGTGATGCAGCATATATCCAAATACCATACGAAACGTGA 771 0.4397 MIGNGGTISQGSVLCYACQIPAKVSVSSFRSFWGHSVEIKPRGMAYTDMSSASSLLLSGGQNLLSRTIPVLPSLRKSCRAPRAMKEGSSAGFKFPPMTRKPRWWWRTLACIPYLLPIHQVWMYAKTAYNLHPFIEAFEFITYPFFMSIGSLPRWSLIAYFLIAYITIVRRKEWPHFFRFHVAVGMLIEIALQVTGLVSRWMPPAFYWGSLGMHFWTTAFFLYLFTSIECVRCALTGMYADIPFVCDAAYIQIPYET* 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0273 256 PANTHER PROTEIN TIC 20-II, CHLOROPLASTIC 22 255 IPR005691 -
Mtr4g0273 256 Pfam Chloroplast import apparatus Tic20-like 74 248 IPR005691 -
Mtr4g0273 256 TIGRFAM 3a0901s05TIC20: chloroplast protein import component, Tic20 family 1 255 IPR005691 -
Mtr4g0273 256 PANTHER HIT-TYPE ZINC FINGER FAMILY PROTEIN-RELATED 22 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0273 Mtr-Chr4 3302779 3305877 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g0273 38 251 Chloroplast and Mitochondria Gene Families AT4G03320 35.000 5.06e-40 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0273 - - gmx:100818669 354.755