Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0262 ATGACTTCTTCATTTAAGACCCTCAACAAACAATTCCCTCTTCTACCTCCTTTCCATCACCCTCATAAATTTCCTCATCACCATTCTTCTTCTTCTTCTTCTATTAATTACTCTTACACCCCCATCTTCTCTTCCTCTCAATTTCGTTCATCATCTTGCTCAACATCTCAATCTACAACATATATGGAGGTCTTCAAAGCAATTGCTAAGCAAGAAGCTGCAGCTCATGGTAGTGTTGCTATCAGAGCTGATCAGCAGAGTTATAGTTACAAGCAGCTCATCTCGTCGGCACAGAAGATATCTAATCTTTTGTGTGGAAATGATGTGAAGGGAAATCTTGGTGGAGCTCGGATAGGAATAGTAGCCAAACCGTCTGCCGAATTTGTTGCTGGAGTACTTGCTACTTGGTTTAGTGGAGGTGTTGCTGTTCCACTTGCACTCAGCTATCCAGAAGTAGAGCTCCTCTATGTGATGAATAATTCGGATGTTTCTGCAATACTGAGTACTGAAGATCATAGTGAACTAATGCAAAGCATTGCCAATAAAACCTCATCGCAATTTTTCCACATCCCGCCCGTTCCTAATAATTCCTCAGAGAAGAGCAGAAATGGACATTCAAAAAATGGGGAAATTGATGCAGACAGTATTTTCCCGGAAAACATTGAAAGATCAAGTGAAGATCCGGCACTGATTTTATACACTAGCGGGACAACAGGTAAACCTAAGGGAGTTGTTCATACACACAGAAGCATCCTTGCTCAGGTCCAAACATTGACAAAAGCATGGGGGTACACATCTGCTGATCAGTTTTTGCACTGTCTACCACTACATCATGTCCATGGGATTTTCAATGGTTTACTGGCCCCTCTCTACGCAGGTTCCACGGTTGAGTTTTTGCCGAAGTTTAGTGTCAGTGGAATTTGGAAGAGATGGCGTGAGTCATATCCAACTGAAGGATCTAAAGCTGATGGTGCTATAACCGTATTCACTGGAGTTCCAACTATGTACACCCGGTTAATACAAGGTTATCGTGCCATGGATCCTGAGCTACAAGCGACTTCAGCATCTGGCGCAAGGAACTTGCGTCTAATGATGTGTGGATCCTCTGCACTTCCTCAACCTGTTATGCAAGAATGGGAATCCATCACCGGACATCGCTTATTGGAGCGATATGGCATGACTGAATTTGTCATGGCGTTGTCAAATCCATTGAACGGCGAGCGTAAAGCAGGCACCGTTGGCAAACCATTTCCCGGTGTGCAGGTCAAGATTCTTGCAGATGAGGAGCATGAGGGTGAAGAAACTGGAGCTGGTGAGCTTTGCGTTAAAAGCCCTTCATTGTTTAAAGAATATTGGAAACTTCCTGAGGTAACGAAGGAATCATTTACAGACGATGGATTCTTTAAGACTGGAGATGCAGTTACTACGGATAAAGATGGATATTTCATCATTTTAGGACGTACTAACGCAGATATCATCAAGAGCGGTGGCTATAAGCTTTCTGCATTAGAAATTGAATCAGTAATATTAGAGCATCCAACTGTCTCAGAATGTTGCGTTTTGGGCTTACCGGACAAAGACTACGGAGAAATTGTTTGTGCGATTATCGTGCCAAAGGAGAAGCAAGATAAAGAGTCAAAACCTCCTCTAAGCCTTGAAGAATTATCCAACTGGGCCAAGAATAAACTTGCACCTTACAAGATACCAACTCAACTAATCGTGTGGGAGACGCTCCCTCGCAATGCAATGGGGAAGGTTAATAAAAAAGAGCTGAAGAAGCTGGTGCCTTCAGAACAGTAA 1800 0.4306 MTSSFKTLNKQFPLLPPFHHPHKFPHHHSSSSSSINYSYTPIFSSSQFRSSSCSTSQSTTYMEVFKAIAKQEAAAHGSVAIRADQQSYSYKQLISSAQKISNLLCGNDVKGNLGGARIGIVAKPSAEFVAGVLATWFSGGVAVPLALSYPEVELLYVMNNSDVSAILSTEDHSELMQSIANKTSSQFFHIPPVPNNSSEKSRNGHSKNGEIDADSIFPENIERSSEDPALILYTSGTTGKPKGVVHTHRSILAQVQTLTKAWGYTSADQFLHCLPLHHVHGIFNGLLAPLYAGSTVEFLPKFSVSGIWKRWRESYPTEGSKADGAITVFTGVPTMYTRLIQGYRAMDPELQATSASGARNLRLMMCGSSALPQPVMQEWESITGHRLLERYGMTEFVMALSNPLNGERKAGTVGKPFPGVQVKILADEEHEGEETGAGELCVKSPSLFKEYWKLPEVTKESFTDDGFFKTGDAVTTDKDGYFIILGRTNADIIKSGGYKLSALEIESVILEHPTVSECCVLGLPDKDYGEIVCAIIVPKEKQDKESKPPLSLEELSNWAKNKLAPYKIPTQLIVWETLPRNAMGKVNKKELKKLVPSEQ* 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0262 599 Gene3D - 64 487 IPR042099 -
Mtr4g0262 599 Pfam AMP-binding enzyme 73 494 IPR000873 -
Mtr4g0262 599 MobiDBLite consensus disorder prediction 190 215 - -
Mtr4g0262 599 CDD MCS 78 593 - -
Mtr4g0262 599 Pfam AMP-binding enzyme C-terminal domain 504 585 IPR025110 -
Mtr4g0262 599 PANTHER MALONATE--COA LIGASE-LIKE 3 593 - -
Mtr4g0262 599 ProSitePatterns Putative AMP-binding domain signature. 231 242 IPR020845 -
Mtr4g0262 599 Gene3D - 490 598 IPR045851 -
Mtr4g0262 599 PANTHER ACYL-COA SYNTHETASE 3 593 - -
Mtr4g0262 599 SUPERFAMILY Acetyl-CoA synthetase-like 56 596 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0262 Mtr-Chr4 3110928 3118859 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g0262 226 595 Monolignol Biosynthesis Gene Families AT4G19010 27.487 1.55e-41 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0262 K18660 - gmx:100813324 917.146