Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0218 ATGGTGAAATCAAAGAAATTCAGAGGTGTTAGGCAACGCCATTGGGGCTCTTGGGTCTCGGAGATTCGTCATCCATTATTGAAAAGGAGGGTTTGGTTAGGAACATTTGAGACAGCTGAAGAAGCAGCTAGAGCATATGATGAAGCAGCCATTCTAATGAGTGGAAGAAATGCAAAAACAAATTTCCCTGTTTCTGATAACAATTCAATAGCAAATAGCAACAACAAAACATTTGCAACATCCTCTTCAACTTCCACAAAACCTAATACATCACTCTCTGCAATTCTAAGTGCAAAACTTAGAAAATGTTGCAAGTCACCTTCACCTTCCCTCACTTGTCTAAGGCTTGACACTGAGAATTCACACTTTGGAGTGTGGCAGAAAAGAGCAGGACCTCGTTCGGACTCGAGCTGGATCATGATGGTTGAACTGGAAAGGAAGAAGAAAGAACAAGAAGAAGAGAGTGAAGATTCGGAGAAGGCCGTGAAACCGGAAAATGAAGATGAAGAAGGAAATGATAAGAACAAAGGATTGGATGAAGAACAACGAATTGCACTTCAGATGATAGAAGAACTTCTCAATAGGAATTAA 591 0.4044 MVKSKKFRGVRQRHWGSWVSEIRHPLLKRRVWLGTFETAEEAARAYDEAAILMSGRNAKTNFPVSDNNSIANSNNKTFATSSSTSTKPNTSLSAILSAKLRKCCKSPSPSLTCLRLDTENSHFGVWQKRAGPRSDSSWIMMVELERKKKEQEEESEDSEKAVKPENEDEEGNDKNKGLDEEQRIALQMIEELLNRN* 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0218 196 PRINTS Ethylene responsive element binding protein signature 7 18 IPR001471 GO:0003700|GO:0006355
Mtr4g0218 196 PRINTS Ethylene responsive element binding protein signature 29 45 IPR001471 GO:0003700|GO:0006355
Mtr4g0218 196 PANTHER ETHYLENE RESPONSE FACTOR 1 196 - -
Mtr4g0218 196 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 1 196 - -
Mtr4g0218 196 MobiDBLite consensus disorder prediction 146 183 - -
Mtr4g0218 196 SUPERFAMILY DNA-binding domain 6 65 IPR016177 GO:0003677
Mtr4g0218 196 Gene3D AP2/ERF domain 5 65 IPR036955 GO:0003700|GO:0006355
Mtr4g0218 196 Pfam AP2 domain 6 54 IPR001471 GO:0003700|GO:0006355
Mtr4g0218 196 ProSiteProfiles AP2/ERF domain profile. 6 63 IPR001471 GO:0003700|GO:0006355
Mtr4g0218 196 CDD AP2 5 65 IPR001471 GO:0003700|GO:0006355
Mtr4g0218 196 Coils Coil 141 161 - -
Mtr4g0218 196 SMART rav1_2 6 69 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0218 Mtr-Chr4 2567074 2568333 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g0218 1 196 AP2-EREBP Transcription Factor Family AT1G15360 68.342 8.48e-88 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mtr4g0218 AP2 8.3e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0218 - - rcn:112190153 253.832
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g0218 4 2567074 2568333 Mtr4g0218 4 2567074 2568333 ECH