Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0199 ATGAATGAATCTTGCCATTGGATATATCTTCATCACCAAGCAAAGCCGCGTATCATCCATAGAGATATCAAACCCAATAATGTGTTATTGGATTCAGATTTCTGAGCTCGAATCAGTGGTTTCGGGTTCGCTAGGTTGATCCCTGATGGAGCAACACAAGTGACTGCAAATGTTAAGGGTACCTTAGGCTACGTTGCACCAGAATATGCTATATCAGGTAAAGTAACTAAAAGTTGAGATGTTTATAGCTTTGGTATCCTACTTCTAGAACTAGCTAGTGGGAAAAAACAAACTATAAAGGTTAGTTCCACATTGAAGAAAACAATAGTTGATTGCGCATTGTCATTGGTTTGTGAGAAGAAATTCAATGAAATTGTTGATCCAAGACTAAATGGTAATTATGTTGAAGAAGAACTTAAAAGAGTTGTTATTGCTGGATTGATATGTGCTCAAGTTTTTCATGAGAAAAGACCTACCGTGCTTGATGTGGTAGAGTTATTGAAGGGTGAATCTGAAGATAAATTTTCACATATAGAGAGTAGCGAAATGTTTAGAAGATCTGCAACTTCATAA 573 0.363 MNESCHWIYLHHQAKPRIIHRDIKPNNVLLDSDF*ARISGFGFARLIPDGATQVTANVKGTLGYVAPEYAISGKVTKS*DVYSFGILLLELASGKKQTIKVSSTLKKTIVDCALSLVCEKKFNEIVDPRLNGNYVEEELKRVVIAGLICAQVFHEKRPTVLDVVELLKGESEDKFSHIESSEMFRRSATS* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0199 188 PANTHER OS01G0253100 PROTEIN 8 187 IPR045271 GO:0004714|GO:0006468
Mtr4g0199 188 Gene3D Transferase(Phosphotransferase) domain 1 7 183 - -
Mtr4g0199 188 SUPERFAMILY Protein kinase-like (PK-like) 9 166 IPR011009 -
Mtr4g0199 188 PANTHER - 8 187 - -
Mtr4g0199 188 ProSiteProfiles Protein kinase domain profile. 1 173 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g0199 188 Pfam Protein kinase domain 9 161 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g0199 188 ProSitePatterns Serine/Threonine protein kinases active-site signature. 18 30 IPR008271 GO:0004672|GO:0006468
Mtr4g0199 188 SMART serkin_6 1 165 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0199 Mtr-Chr4 2364791 2365646 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g0199 9 161 Trihelix Transcription Factor Family AT1G68690 46.541 5.04e-39 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Mtr4g0199 Pkinase 1.8e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0199 - - mtr:MTR_4g010110 264.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g3696 2 51029709 51033105 Mtr4g0199 4 2364791 2365646 PCT