Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0179 ATGGAAGCAAGTGGGGGTGTTAATAACAATAAGAAGGTGTGTGTAACTGGAGCAGGAGGGTTTGTAGCATCATGGCTTGTTAAACTTCTTCTTTCCAAAGGTAGTCCAAAATATGAACACTTGCTGAAACTGGAAAAAGCTTCTGAGAACCTTACACTCTTCAAAGCAGATATCTTGGATTATGAATCGGTTTACTCTGCGATTGTTGGATGCAGTGCAGTTTTCCATGTTGCTAGCCCTGTACCTTCAACAGTTGTACCTAATCCCGAGCTTAATCCGCAGGTGGAAGTGATTGAGCCTGCAGTGAAGGGAACTGCTAATGTACTTGAAGCCTGTCTCAAAGCTAATGTGGAACGTGTCGTCTTTGTATCATCTGTAGCTGCTGTTGCTATCAACCCTAATTTACCAAAAGATAAGGCGATTGACGAGTCTTGTTGGTCTGACAAAGACTACTGCAAAAATACTAAGAACTGGTACTGTTATGCCAAGACAGAAGCAGAAGAACAGGCCCTGCATTTCGCGAAAAGAACTGGACTTAACGTGGTAACCATTTGTCCTACTCTTGTTTTGGGACCAATTTTACAGTCAACCACAAATGCAAGTAGCTTGGTTCTCGTCAAACTTTTAAAAGAAGGTTGTGACTCAGTGGAGAATAAGCTTCGTTGGATTGTTGATGTACGAGATGTAGTTAATGCAATACTGTTGGCTTATGAGAATCACGAGGCAGACGGGAGATACATCTGCACTTCACACGCTATCGTCACACGCGATTTGGTGGAGAGATTGAAGGGTATATATCCAAACTACAAGTACCCTACGAACAGCTATATTGAGATGGATGATTACAAAATGCTGAGCTCAGAGAAACTGCAAAGTTTGGGTTGGAAACTCAGGCCATTGGAGGAAACACTCATTGACTCTGTTGAGAGCTATAAGGAGGCTGGACTACTTCAATCACAATAA 963 0.4237 MEASGGVNNNKKVCVTGAGGFVASWLVKLLLSKGSPKYEHLLKLEKASENLTLFKADILDYESVYSAIVGCSAVFHVASPVPSTVVPNPELNPQVEVIEPAVKGTANVLEACLKANVERVVFVSSVAAVAINPNLPKDKAIDESCWSDKDYCKNTKNWYCYAKTEAEEQALHFAKRTGLNVVTICPTLVLGPILQSTTNASSLVLVKLLKEGCDSVENKLRWIVDVRDVVNAILLAYENHEADGRYICTSHAIVTRDLVERLKGIYPNYKYPTNSYIEMDDYKMLSSEKLQSLGWKLRPLEETLIDSVESYKEAGLLQSQ* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0179 320 Pfam NAD dependent epimerase/dehydratase family 13 243 IPR001509 -
Mtr4g0179 320 PANTHER NAD(P)-BINDING ROSSMANN-FOLD SUPERFAMILY PROTEIN 9 318 - -
Mtr4g0179 320 CDD FR_SDR_e 13 295 - -
Mtr4g0179 320 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 8 315 IPR036291 -
Mtr4g0179 320 Gene3D - 6 320 - -
Mtr4g0179 320 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 9 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0179 Mtr-Chr4 2147125 2150771 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g0179 12 317 Monolignol Biosynthesis Gene Families AT2G33590 61.635 8.29e-129 369
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0179 - - mtr:MTR_4g009040 584.334