Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0170 ATGGAAGAGTCAGGAGAAAATTGGCCTTCTCATGATTCTGATTTGGAAATACATGATAAAGTCATTTTTGAAGATGGAGAATCTGAATCTGTGTGTGGTGATGATGAGTATCAAATTGGAGATCCCACAGATATTACAAAGGAAAGCAATGAGAAGGAGATAACACAGAGATTGAAAGAACTTTCAGATGTCATAGGCTTAAAGAAGATGGACGACGACACTTCAATCGTGGACAAAGCTAGAGACTATGTGGAAAAACTTGCAGAACGTGTGAGAGAGCTAGAACAAGAAGCTGGATCAAACATTTGTAGCAACAAAAGGACCAAAGTGAATTCAGATGAGTACAATTGTGGAACAGGTGATAATACTCTTCCAGAGATCAAAGCAAGAGTGTCAAAAAAAGATGTACTTGTCATAGTCCATTGTGAGAAACAAAAGGGTATCTTGCTCAAAATACTGACCCACCTTGCAAGTCTTCATCTTTCAGTAGTTAATAGTAGTGTCTTGCAATTTGGAAAATCCATCCTTGACATCACCATCATTTGTAAGATGGGTGATGGCTACAACATCTCAGTGAATGAATTAGTGAAAACTCTCAGAATGGTGATATCGACACAATAG 621 0.38 MEESGENWPSHDSDLEIHDKVIFEDGESESVCGDDEYQIGDPTDITKESNEKEITQRLKELSDVIGLKKMDDDTSIVDKARDYVEKLAERVRELEQEAGSNICSNKRTKVNSDEYNCGTGDNTLPEIKARVSKKDVLVIVHCEKQKGILLKILTHLASLHLSVVNSSVLQFGKSILDITIICKMGDGYNISVNELVKTLRMVISTQ* 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0170 206 PANTHER BHLH TRANSCRIPTION FACTOR 37 205 - -
Mtr4g0170 206 Coils Coil 77 97 - -
Mtr4g0170 206 PANTHER PROTEIN, PUTATIVE-RELATED 37 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0170 Mtr-Chr4 2007227 2010650 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g0170 45 204 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 38.728 2.31e-25 99.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0170 - - cam:101515326 180.259