Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0158 ATGGAAGCAAGTGGGGGTGTTAATAACAATAAGAAGGTGTGTGTAACTGGAGCAGGAGGGTTTGTAGCATCATGGCTTGTTAAACTTCTTCTTTCCAAAGGTTACTTTGTCCATGGAACTGTTAGAGAGCCTGGTAGTCCGAAATATGAACACTTGCTGAAACTGGAAAAAGCTTCTGAGAACCTTACACTCTTCAAAGCAGATATCTTGGATTACGAATCAGTTTACTCGGCAATTGTTGGATGCAGTGCAGTTTTCCATGTTGCTAGCCCTGTACCTTCAACAGTTGTACCTAATCCTGAGCTTAATCTGCAGGTGGAAGTGATTGAGCCTGCAGTGAAGGGAACTGCTAATGTACTTGAAGCTTGTCTCAAAGCTAATGTGGAACGTGTCGTCTTTGTATCATCTGCAGCTGCTGTTGCTATCAACCCTAATTTACCAAAAGATAAAGCGATCGATGAGTCTTGTTGGTCTGACAAAGACTACTGTAAAAATACTCAGAACTGGTACTGTTATGCCAAGACAGAAGCAGAAGAACAGGCCTTCAATTTCGCGAAAAGAACTGGACTTAACGTGGTAACCATTTGTCCTACTCTTGTTTTGGGACCAATTTTACAGTCGACCACAAATTCAAGTAGCTTGGCTCTCATCAAAATTTTAAAAGAAGGACACGACTCATTGGAGAATAAGCTCCGTTGGATTGTTGACGTACGAGACGTAGTTAATGCAATACTTTTGGCTTATGAGAATCACAAGGCAGACGGGAGATACATCTGCACTTCACACACTATCAACACACGAGATTTGGTGGAGAGATTGAAGAGTATATATCCCAACTACAAGTACCCTACGAACTATATTGAGATGGATGATTACAAAATGCTGAGCTCAGAGAAACTGCAAAGTTTGGGTTGGAAATTCAGGCCATTGGAGGAAACACTCATTGACTCTGTTGAGAGCTATAAGGAGGCTGGACTACTTCAATCAGCATAA 993 0.4169 MEASGGVNNNKKVCVTGAGGFVASWLVKLLLSKGYFVHGTVREPGSPKYEHLLKLEKASENLTLFKADILDYESVYSAIVGCSAVFHVASPVPSTVVPNPELNLQVEVIEPAVKGTANVLEACLKANVERVVFVSSAAAVAINPNLPKDKAIDESCWSDKDYCKNTQNWYCYAKTEAEEQAFNFAKRTGLNVVTICPTLVLGPILQSTTNSSSLALIKILKEGHDSLENKLRWIVDVRDVVNAILLAYENHKADGRYICTSHTINTRDLVERLKSIYPNYKYPTNYIEMDDYKMLSSEKLQSLGWKFRPLEETLIDSVESYKEAGLLQSA* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0158 330 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 8 325 IPR036291 -
Mtr4g0158 330 CDD FR_SDR_e 13 305 - -
Mtr4g0158 330 PANTHER NAD(P)-BINDING ROSSMANN-FOLD SUPERFAMILY PROTEIN 9 327 - -
Mtr4g0158 330 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 9 327 - -
Mtr4g0158 330 Pfam NAD dependent epimerase/dehydratase family 13 254 IPR001509 -
Mtr4g0158 330 Gene3D - 6 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0158 Mtr-Chr4 1875767 1879743 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g0158 12 327 Monolignol Biosynthesis Gene Families AT2G33590 64.038 1.23e-144 409
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0158 - - mtr:MTR_4g009040 649.818