Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0145 ATGGAAAGCAAAGAAAACATTGAAGCTACCAGAAAGTTATTAACTTCTAGCTTAGAAACATCAATATCTATTTCATCTGCATTAGATGAGTCTAGTTCAAGATTACAGCTTCTTAACCAAAGATGTTTATCCATGCAAGCTTCACTTAAATCCATCTCTATGCAATTGCAAAGTATTTCATTTTCTGATGTTGAACATGGTATAGACAGCGTTCTATGTTCTGTTTCAGCAGTTCTCAAAGTTTTTCAATGTGTTACTCAATTGGAACATTCTCTTTCGATAGATGCGAGTTTTGATTTACTCACATATGTCTCCAACACAAAGAAGCTTGAAGAATCATTGAAGCTTCTCACAGCTAATTGCAAGTTAGCAACCAGTTGGTTGAGAAGTACTTTTGAGTTTTTACAAGACAAAACAACAATTAGTACCAATGAGTTTTACCTTCTTAATGTAAACAAATCCTTGAGAATATTGCAAGAATTGCAAACCATGGAGAACGGTGCTCGTGTCGATGGAGGAATTCTCAGTATTGCTTTTGACAAACTAGAGATTGCTTTTCACAAACTTCTAATGGAAAATTCTATGCCTCTATCTTTGGGTTCATTAACATCACACGTTGGTCAACAAAACAACGCTGTGAAGCAAGATTTGAATTTTCCAAGTTCTTTAACACGGAAGTTACAGGTCATTGCCGAGAGATTAAATGCTAATAACAGGATACAAAAGTGTCAAACTATGTATGTTGAAATTCGTGGAACGAATGCTCATCGAAGTTTGAAGACTTTGGATTTGAGCTACCTTAAGTTTTCAATAACTGAGATTGAAGATGCACATGGAATGGAAAATTTGATAGACAAATGGGGAAACCATTTGGAGTTGGTTGTTAAGAAACTTCTAGACGTGGAGTACAAGCTATGTCATATCGTGTTTGAGAAAATTGGTTTAGAAGCATCCATGAGTTGTTTTGCAAAGATTGCTATTGAATCGGGAATGCTTACATTTATCGAATTTGGAAAGGTTGTTACTGAGAGGAAAAATGATCCTTTCAAGCTGTTGAACTTGTTGTCAATGTTCAAAGTCTTGAATGATTTAAGACTAAAATTTAATCAACTTTTTAGAGGGGAAGCTTGTGAAAGAATTAGAATTGTGACAAAGGATCTTATCACAAGAATTGTTAATGGTGCTAGTGAGATATTCTTGCTACTTTCAGAACAAGTGAAGTTGCAAAGACCAACATGTCCTCCCTCAGATGGAAGTGTTCCTAAATTGGTAAGTTTTGTCACCGATTATTGTAATAGGCTTCTTAGTGATGAGTATAAGCCACAATTGAATAAGGTTTTGGAAATATATCTTAGTTGGAGAAATGAACTATTTGAAGAGGGTATTTTTGTTGGTCAAATATATAGCATAATTAAGGAAGTTGCAGTTAATTTGGATGATTGGTCAAAAGCCTATGAAGATATAAATTTGTCATATTTTTTTATGATGAATAACCATTGTCATTTCTACAATTTAAAGGGTACTTTAGTTGGAAATATGATGGGAGATTCTTGGTTAAGAGCACATGAACAATATAAAGAATATTATGCAGCCCTTTATTTGAGGAATAGTTGGGGAAATCTTCAAAATATTCTTGTAGTTTCATCTTCAATGACTTGTCAAGATTTGGTTAAGAGAATAAATGCTTTTAGTCTAGCTTTTGATGAAATGTATAAGAAGCAATGTAATTGGATAATCTCTGATGTGATATTGAGGGAAAACATATGCAAGCATTTGGTGGAAGGTATTATACCAATCTATAAGGTTTATTTGAAGAATTACATTTTGTCAATTGATCAAAATGATGAAGGTGTGGTTGATAAGCATATTATTAAATATACAACAAAGAGTTTGGAGAATGAGATTTGGTCATTGTTTCAGCCAAAGATGAAGAAGCATGATAATAGCATTAAACACATAGATTTGATTAGTAAAATAAAAGAATTTAGCCATCAATTTCGTTTAACATTAGCTGGTTTATAG 2022 0.3309 MESKENIEATRKLLTSSLETSISISSALDESSSRLQLLNQRCLSMQASLKSISMQLQSISFSDVEHGIDSVLCSVSAVLKVFQCVTQLEHSLSIDASFDLLTYVSNTKKLEESLKLLTANCKLATSWLRSTFEFLQDKTTISTNEFYLLNVNKSLRILQELQTMENGARVDGGILSIAFDKLEIAFHKLLMENSMPLSLGSLTSHVGQQNNAVKQDLNFPSSLTRKLQVIAERLNANNRIQKCQTMYVEIRGTNAHRSLKTLDLSYLKFSITEIEDAHGMENLIDKWGNHLELVVKKLLDVEYKLCHIVFEKIGLEASMSCFAKIAIESGMLTFIEFGKVVTERKNDPFKLLNLLSMFKVLNDLRLKFNQLFRGEACERIRIVTKDLITRIVNGASEIFLLLSEQVKLQRPTCPPSDGSVPKLVSFVTDYCNRLLSDEYKPQLNKVLEIYLSWRNELFEEGIFVGQIYSIIKEVAVNLDDWSKAYEDINLSYFFMMNNHCHFYNLKGTLVGNMMGDSWLRAHEQYKEYYAALYLRNSWGNLQNILVVSSSMTCQDLVKRINAFSLAFDEMYKKQCNWIISDVILRENICKHLVEGIIPIYKVYLKNYILSIDQNDEGVVDKHIIKYTTKSLENEIWSLFQPKMKKHDNSIKHIDLISKIKEFSHQFRLTLAGL* 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0145 673 Pfam Exo70 exocyst complex subunit 286 634 IPR046364 GO:0000145|GO:0005546|GO:0006887
Mtr4g0145 673 PANTHER EXOCYST COMPLEX PROTEIN EXO70 3 662 IPR004140 GO:0000145|GO:0006887
Mtr4g0145 673 Gene3D Exocyst complex component Exo70 133 648 - -
Mtr4g0145 673 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 3 662 - -
Mtr4g0145 673 SUPERFAMILY Cullin repeat-like 78 639 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0145 Mtr-Chr4 1696333 1699278 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g0145 9 646 EXO70 exocyst subunit family AT4G31540 45.191 0.0 565
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0145 K07195 - gmx:121175138 855.129
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g0145 4 1696333 1699278 Mtr4g0145 4 1696333 1699278 ECH