Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0137 ATGCAAAGAAGTAGAGGCCGATTTACATCTACCAAGTCCAACCTTGACGAGTCTGCATCGGCTGAAATGAGTTGCGAGGTAAAGAGTGAAGAATCTGCAGATGGTTTTCAAAATGGTGTTCAAAACAAGAGAGTTCGGTATAATGTTCGTAGAGAGGTAGCATTAAGGATGCAAAGAAATAAAGGCCGATTTACATCTGCCAAGTCCAAGAATGATGAGTCTGCATCGGCTGAAATGAATTGCGGAACAAGTGAAGGTTTGATGGCAGACAACGATGGATCCCAACAGCAAGATAATGTTTGTAGGCAATGTAACATCAGTGAGAAGTGCACGCCAATGATGCGGCGTGGACCTGAAGGGCCAAGAACCCTCTGCAATGCTTGTGGACTTATGTGGGCAAATAAGATTTGCAGGAAAAATGGGAGGTACTAG 432 0.4421 MQRSRGRFTSTKSNLDESASAEMSCEVKSEESADGFQNGVQNKRVRYNVRREVALRMQRNKGRFTSAKSKNDESASAEMNCGTSEGLMADNDGSQQQDNVCRQCNISEKCTPMMRRGPEGPRTLCNACGLMWANKICRKNGRY* 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0137 143 MobiDBLite consensus disorder prediction 1 20 - -
Mtr4g0137 143 Pfam CCT motif 42 67 IPR010402 GO:0005515
Mtr4g0137 143 ProSitePatterns GATA-type zinc finger domain. 101 128 IPR000679 GO:0006355|GO:0043565
Mtr4g0137 143 Gene3D - 90 142 IPR013088 GO:0006355|GO:0008270
Mtr4g0137 143 PANTHER GATA TRANSCRIPTION FACTOR 28 42 138 IPR045280 GO:0006355
Mtr4g0137 143 SMART GATA_3 95 143 IPR000679 GO:0006355|GO:0043565
Mtr4g0137 143 MobiDBLite consensus disorder prediction 69 94 - -
Mtr4g0137 143 Pfam GATA zinc finger 101 135 IPR000679 GO:0006355|GO:0043565
Mtr4g0137 143 PANTHER GATA TRANSCRIPTION FACTOR 28 42 138 - -
Mtr4g0137 143 CDD ZnF_GATA 100 143 IPR000679 GO:0006355|GO:0043565
Mtr4g0137 143 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 96 137 - -
Mtr4g0137 143 MobiDBLite consensus disorder prediction 1 39 - -
Mtr4g0137 143 MobiDBLite consensus disorder prediction 58 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0137 Mtr-Chr4 1591827 1595770 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g0137 42 135 Tify Gene Family AT1G51600 64.894 4.64e-40 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Mtr4g0137 GATA 1e-11 CL0167
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g0137 4 1591827 1595770 Mtr4g0137 4 1591827 1595770 ECH