Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0110 ATGATCATAAACGTTAGAGATTCGACAATGGTGCGGCCGTCAGAGGAGGTTACACAGCGGACGGTGTGGAATTCCAACGTTGATTTGGTGGTACCGAATTTCCATACACCAAGTGTTTACTTTTATAGACCTAATGGTGCTTCCAATTTCTTTGATGCCAAGGTTCTTAAAGAAGCTCTTAGCAAGGTGCTTGTCCCGTTTTATCCAATGGCTGGTCGTCTTCGTCGTGATGAAGATGGTCGTGTTGAGATTGATTGTGATGGTCAAGGGGTGCTCTTTGTCGAGGCTGACACCGGTGGAGTCGTTGATGATTTTGGAGACTTTGCTCCCACGCTTGAGCTCCGCCAGCTTATCCCAGCCGTTGATTATTCGCGCGGAATCGAAACATATCCCCTTCTTGTATTGCAGGTAACATATTTCAAATGTGGAGGAGTCTCACTTGGTGTTGGTATGCAACATCATGTAGCAGATGGAGCTTCTGGTCTTCATTTCATCAATACATGGTCAGATGTAGCTCGTGGCCTAGACGTTTCCATGCCACCATTCATTGACCGGACACTACTCCGTGCCCGCGATCCTCCCCGACCTGTTTTCGATCACATCGAATACAAGCCTCCACCATCAATGAAGACTCATCAACAACCAACAAAACCAGGCTCAGATGGTGCAGCAGTTTCGATTTTCAAATTGACTCGCGAACAACTCAACACATTGAAAGCTAAGTCCAAAGAAGCCGGCAACACAATCCACTACAGTTCTTATGAGATGTTAGCCGGACATGTTTGGAGAAGTGTCTGCAAAGCAAGATCATTACCTGATGATCAAGAAACCAAATTGTATATTGCAACCGATGGACGGGCAAGGTTGCAACCTCCTCCTCCACCAGGTTACTTCGGCAATGTGATATTCACAACAACACCTATAGCTATAGCAGGTGATCTCATGACGAAACCAACATGGTATGCTGCAAGTAGAATTCACAACGCGTTGTCGCGAATGGACAACGAGTATTTGAGATCAGCTCTTGATTTTCTTGAGCTACAACCTGATCTTAAGGCTCTTGTTCGCGGTGCACATACTTTCAAGTGTCCGAATCTTGGTATTACTAGTTGGGCTAGGCTTCCGATACATGATGCTGATTTTGGTTGGGGAAGGCCTATTTTCATGGGACCTGGTGGGATTGCTTATGAAGGGCTTTCTTTCATAATTCCAAGCTCAGCAAATGATGGAAGTTTATCTGTGGCAATTGCTCTTCAGCATGAACATATGAAAGTGTTCAAGGACTTCTTGTATGATATTTGA 1302 0.4516 MIINVRDSTMVRPSEEVTQRTVWNSNVDLVVPNFHTPSVYFYRPNGASNFFDAKVLKEALSKVLVPFYPMAGRLRRDEDGRVEIDCDGQGVLFVEADTGGVVDDFGDFAPTLELRQLIPAVDYSRGIETYPLLVLQVTYFKCGGVSLGVGMQHHVADGASGLHFINTWSDVARGLDVSMPPFIDRTLLRARDPPRPVFDHIEYKPPPSMKTHQQPTKPGSDGAAVSIFKLTREQLNTLKAKSKEAGNTIHYSSYEMLAGHVWRSVCKARSLPDDQETKLYIATDGRARLQPPPPPGYFGNVIFTTTPIAIAGDLMTKPTWYAASRIHNALSRMDNEYLRSALDFLELQPDLKALVRGAHTFKCPNLGITSWARLPIHDADFGWGRPIFMGPGGIAYEGLSFIIPSSANDGSLSVAIALQHEHMKVFKDFLYDI* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0110 433 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 4 432 - -
Mtr4g0110 433 PANTHER SHIKIMATE/QUINATE HYDROXYCINNAMOYLTRANSFERASE 4 432 - -
Mtr4g0110 433 MobiDBLite consensus disorder prediction 200 221 - -
Mtr4g0110 433 Pfam Transferase family 3 428 - -
Mtr4g0110 433 Gene3D - 214 433 IPR023213 -
Mtr4g0110 433 Gene3D - 1 205 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0110 Mtr-Chr4 1339326 1343664 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g0110 1 433 Monolignol Biosynthesis Gene Families AT5G48930 76.905 0.0 712
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0110 K13065 - gmx:100820075 813.913
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g0110 4 1339326 1343664 Mtr4g0110 4 1339326 1343664 ECH
Mtr2g3761 2 51660979 51664418 Mtr4g0110 4 1339326 1343664 PCT