Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0108 ATGGGGATATATCTGAGTACCCCGAAAACAGAGAAGGCCTCTGAAGATGGTGAGAATGGCATGCTTCGCTTTGGTTTGTCTTCCATGCAGGGTTGGCGTGCTTCTATGGAAGATGCTCATGCAGCTCATCCGTATCTGGACGAGTCTACGTCTTACTTTGGTGTTTATGATGGCCATGGAGGTAAAGCTGTTTCAAAATTTTGTGCCAAGTTTCTACACCAGCAGGTGCTTAGGCATGAAGCTTATTTAGCTGGAGATATAGCCACGTCTTTACAGAAATCTTTCCTCAGAATGGATGAGATGATGCGTGGACAAAGAGGGTGGAGAGAATTAGCAGTCTTGGGAGATAAAATGGAAAAGTTGTCTGGTATGCTTGAGGGGTTTATATGGTCTCCCAGGAGTAGTGAAGCCAATGAACGTGCCGATGAGTGGGCTTTTGAGGAGGGACCCCATTCTGATTTCAGTGGGCCTAACTGTGGAAGCACGGCGTGTGTGGCTGTCATCAGAGGAAACAAACTTGTTGTTGCAAATGCTGGTGATTCTAGATGTGTGTTATCAAGGAAAGGCCAGGCACACAATTTGTCTAAAGATCACAAGCCTGATCTTGAGGTTGAGAAAGACAGGATTCTAAAAGCTGGCGGTTTCATCCAAGTTGGACGAGTCAATGGAAGTTTGAACTTGGCTAGAGCAATTGGAGATATGGAATTCAAGCAGAACAAGTATTTGCCTGCTGAAAAGCAGGTTGTGACTGCTGATCCTGACGTAACTTCGGTTGAGCTTTGCAAAGATGATGAGTTTCTTGTGATAGCTTGTGATGGGATATGGGATTGCATGTCCAGCCAGCAGCTTGTGGACTTCATACATGGCCAGTTAAAGACGGAGAATAAACTTTCTGTGGTTTGTGAGAAAGTATTCGATAGGTGCTTGGCACCAACAGCTGGTGGTGAGGGATGTGATAACATGACCATGATCTTGATTCAGTTCAAAAATCCTCTGACTTCAGATGCTTCTGTCACAGACCAGCCTGAGTCATCTGTTCAACCCACTCCATTACCTCCGGCACAACAGTCTGAATCTGACAGAAAGTTAGATTAA 1095 0.4521 MGIYLSTPKTEKASEDGENGMLRFGLSSMQGWRASMEDAHAAHPYLDESTSYFGVYDGHGGKAVSKFCAKFLHQQVLRHEAYLAGDIATSLQKSFLRMDEMMRGQRGWRELAVLGDKMEKLSGMLEGFIWSPRSSEANERADEWAFEEGPHSDFSGPNCGSTACVAVIRGNKLVVANAGDSRCVLSRKGQAHNLSKDHKPDLEVEKDRILKAGGFIQVGRVNGSLNLARAIGDMEFKQNKYLPAEKQVVTADPDVTSVELCKDDEFLVIACDGIWDCMSSQQLVDFIHGQLKTENKLSVVCEKVFDRCLAPTAGGEGCDNMTMILIQFKNPLTSDASVTDQPESSVQPTPLPPAQQSESDRKLD* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0108 364 ProSitePatterns PPM-type phosphatase domain signature. 52 60 IPR000222 GO:0043169
Mtr4g0108 364 MobiDBLite consensus disorder prediction 334 364 - -
Mtr4g0108 364 Gene3D - 1 329 IPR036457 -
Mtr4g0108 364 PANTHER PROTEIN PHOSPHATASE 2C 60 ISOFORM X1-RELATED 1 340 - -
Mtr4g0108 364 Pfam Protein phosphatase 2C 138 313 IPR001932 -
Mtr4g0108 364 Pfam Protein phosphatase 2C 23 104 IPR001932 -
Mtr4g0108 364 SUPERFAMILY PP2C-like 3 330 IPR036457 -
Mtr4g0108 364 ProSiteProfiles PPM-type phosphatase domain profile. 23 328 IPR001932 -
Mtr4g0108 364 PANTHER PROTEIN PHOSPHATASE 2C 1 340 IPR015655 GO:0004722|GO:0006470
Mtr4g0108 364 MobiDBLite consensus disorder prediction 334 356 - -
Mtr4g0108 364 CDD PP2Cc 23 328 IPR001932 -
Mtr4g0108 364 SMART PP2C_4 13 326 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0108 Mtr-Chr4 1303763 1313198 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g0108 1 345 PP2C-type Phosphatase Gene Family AT2G25070 73.988 0.0 550
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0108 K17499 - gmx:100776787 652.129
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g0108 4 1303763 1313198 Mtr4g0108 4 1303763 1313198 ECH