Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0080 ATGTCTTTGAAGATAGCAGCTGAAAATTGGCAAAAACCATCATCAAAGAAGGTTGAAGAGGCAGTGATAGTGATAAGAAGTTATGATGAAGAGAAACACAAAGTGGGAGTAGAAAAATTGGAGAGGCTTTGTGAGGTTGGACAAAGAGGAAAACCTTCTCTTGTTACTGACCTATTGGGTGATCCTATATGTAGAATTCGTCACTTTCAATTACATGTTATGCTGGTTGCAGAATATGAAGAAGAAGGAGAAGTTGCTGGAGTGATAAGGGGTTGTGTGAAAACAGTTACAAGAGGGAATTCAGCTTATGTAAAACTAGCTTATGTTTTAGGACTTAGAGTCTCTCCCAAACACAGGAGATTTGGCATTGGCACAAAATTAGTTGAACATTTAGAAGAGTGGTGCAAGCAAAAAGGGGCTAAGTATGCATATATGGCAACTGATTGTACAAATGAGCCATCCATCAATCTGTTCACAAAAAAATGTGAATACTCAAAATTCAGGACTCTAACAATGCTAGTACAGCCTGTTCATGCTCACTACAAGCCAATCAACACAAACATTGCCGTCCTTCGCCTACCACCGCGCTTAGCCGGGACGACATACAACCATATGTTTGCCAATGCAGAATTTTTCCCAAGAGACATAGACTTGATTTTGTCTAACAAACTTAATTTGGGCACATTTATGGCCATCCCTAAAAAAGACCTAACAAAATGTGATCCAAAAAATGGTATTTTCCCTCCAAGCTATGCAGTATTAAGTGTGTGGAACACAAAAGAAGTGTTCAAATTGCAAGTTAAAGGAGCTTCAACATTTGTACATGCATGTTGTGTAGGTACAAGATTATTAGATGAATGTATGCCATGGCTAAGGTTACCTTCATTTCCTAATGTTTTTAGGCCATTTGGGATTTATGTAATGTATGGATTACACATGGAGGGTAAATATGGAAAACAACTTATGAAGTCATTATGTGGATTTGTACATAATATGGCTAGAGATGATGGTGGTTGTGGGGCCATTGTGACTGAAGTGAGTCAAAGGGACCCAGTTAGAGAAGTGATCCCACATTGGAGGAAATTATCTTGGGCTGAGGACATGTGGTGCATTAAGAGTCTTGAACACATGAAGAAGGATGATAGTATCAATGAAAAATGTGGACCCTCAGATTGGTTCAATTATAGATCTTCTTCATCAGTAATTTTTGTTGATCCTCGTGATTTTTAA 1230 0.3829 MSLKIAAENWQKPSSKKVEEAVIVIRSYDEEKHKVGVEKLERLCEVGQRGKPSLVTDLLGDPICRIRHFQLHVMLVAEYEEEGEVAGVIRGCVKTVTRGNSAYVKLAYVLGLRVSPKHRRFGIGTKLVEHLEEWCKQKGAKYAYMATDCTNEPSINLFTKKCEYSKFRTLTMLVQPVHAHYKPINTNIAVLRLPPRLAGTTYNHMFANAEFFPRDIDLILSNKLNLGTFMAIPKKDLTKCDPKNGIFPPSYAVLSVWNTKEVFKLQVKGASTFVHACCVGTRLLDECMPWLRLPSFPNVFRPFGIYVMYGLHMEGKYGKQLMKSLCGFVHNMARDDGGCGAIVTEVSQRDPVREVIPHWRKLSWAEDMWCIKSLEHMKKDDSINEKCGPSDWFNYRSSSSVIFVDPRDF* 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0080 409 PANTHER OS12G0561600 PROTEIN 1 409 - -
Mtr4g0080 409 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 72 171 IPR016181 -
Mtr4g0080 409 Gene3D - 19 168 - -
Mtr4g0080 409 CDD NAT_SF 79 144 - -
Mtr4g0080 409 Pfam Acetyltransferase (GNAT) family 75 163 IPR000182 GO:0016407
Mtr4g0080 409 PANTHER N-ACETYLTRANSFERASE 1 409 - -
Mtr4g0080 409 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 23 194 IPR000182 GO:0016407
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0080 Mtr-Chr4 983133 985915 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Mtr4g0080 Acetyltransf_1 6.3e-18 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0080 - - mtr:MTR_4g007130 840.876
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g0080 4 983133 985915 Mtr4g0080 4 983133 985915 ECH