Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0075 ATGGATTGTTCATCATATATCAACACTTCTTTGGATCTCAACATTATTCCCTATAGAGCTCATGAAGAAGTTCCAAAGAAGGAGGTGGAAAGCAACTTTTTCTCCTTGGGGATGACCAACTTTTCTGTGAAAAATGAGTCTATTGATGAATTGGAGGAGGAACTAAAAAGGGTAACCTTAGAAAACAAGAAATTGGTGGAAATGCTCTCAGTGGTTTGTGAGAATTACAACACTTTGAGAAGTCATTTGATGGAATATATGAAGAGAAATCCTGAGAAAGAAGTTAGCACATCATCAAAGAAAAGGAAATCTGAAAGCAGCAATAATAACAATAGTAATTTGATTGGAATTAACAATGGAAATTCCGAGAGTAGCTCTACCGATGAAGAATCGTGCAAGAAACCAAGGGAAGAAGAAAATATTAAAGCCAAAATTTCAAGAGCTTATGTTAGGACTGAAGTTTCTGATACAGGCCTTATTGTGAAGGATGGATACCATTGGAGGAAATATGGACAAAAAGTGACCAGAGATAACCCTTGTCCAAGAGCTTATTTCAAATGCTCTTTTGCTCCAAGCTGCCCTGTCAAAAAGAAGGTGCAAAGAAGTGTGGATGATCAATCTATGCTTGTTGCTACTTATGAAGGGGAGCACAATCATCCTCAACCTCCTCAAATTGAGTCAACATCAGGTTCTGGTCGTAGCGTGAACCACAGTTCGGTACCTTGTTCGGCGTCACTCACCTCACCAGCAGCACCAAAAGTGGTTACACTAGACTCAACAACTTCTAAGAATAGTAAAGATTCCAAAAGTATTGAACCAAGAAAAGATTCACCTAAGGAGGCTAAGGTACCAAAGAATTTGGTGGAACAAATGGCTACTTCATTGACAACTGATCCAAATTTTAGAGCAGCACTTGTTGCAGCCATTTCAGGAAGATTGGTGCACAATAATTAA 954 0.3868 MDCSSYINTSLDLNIIPYRAHEEVPKKEVESNFFSLGMTNFSVKNESIDELEEELKRVTLENKKLVEMLSVVCENYNTLRSHLMEYMKRNPEKEVSTSSKKRKSESSNNNNSNLIGINNGNSESSSTDEESCKKPREEENIKAKISRAYVRTEVSDTGLIVKDGYHWRKYGQKVTRDNPCPRAYFKCSFAPSCPVKKKVQRSVDDQSMLVATYEGEHNHPQPPQIESTSGSGRSVNHSSVPCSASLTSPAAPKVVTLDSTTSKNSKDSKSIEPRKDSPKEAKVPKNLVEQMATSLTTDPNFRAALVAAISGRLVHNN* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0075 317 Pfam WRKY DNA -binding domain 162 220 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr4g0075 317 MobiDBLite consensus disorder prediction 221 264 - -
Mtr4g0075 317 MobiDBLite consensus disorder prediction 265 283 - -
Mtr4g0075 317 MobiDBLite consensus disorder prediction 88 139 - -
Mtr4g0075 317 Gene3D WRKY domain 144 223 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mtr4g0075 317 SMART WRKY_cls 161 221 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr4g0075 317 MobiDBLite consensus disorder prediction 215 285 - -
Mtr4g0075 317 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 1 317 IPR044810 GO:0003700
Mtr4g0075 317 SUPERFAMILY WRKY DNA-binding domain 159 222 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mtr4g0075 317 ProSiteProfiles WRKY domain profile. 160 222 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr4g0075 317 PANTHER TRANSCRIPTION FACTOR 1 317 - -
Mtr4g0075 317 Coils Coil 41 68 - -
Mtr4g0075 317 MobiDBLite consensus disorder prediction 102 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0075 Mtr-Chr4 947453 950142 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g0075 4 317 WRKY Transcription Factor Family AT1G80840 50.621 4.75e-94 279
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mtr4g0075 WRKY 2.8e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0075 - - gmx:100807966 426.402
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g0075 4 947453 950142 Mtr4g0075 4 947453 950142 ECH