Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0072 ATGGATCAACAAAACAAAAAAAGTTTCCAAAACCCAAGAAACGTAATATTCAACAAATATGAGATGGGTAAAGTCTTGGGTCAAGGAAACTTTGCAAAGGTTTACCATTGTAAAAACCTTTCAGAAAATGAGAGTGTAGCCATCAAGGTGATAAAGAAAGAGAGGTTGAAAAAAGAGAGGTTGGTGAAGCAAATCAAGCGCGAAGTTTCAGTGATGCGTCTCGTTCGCCATCCTCATATCGTTGAACTCAAAGAAGTTATGGCAACAAAGGGAAAAATCTTTCTTGTAGTGGAATATGTAAAAGGAGGTGAACTCTTCAACAAGGTAGCAAAAGGAAAATTGAATGAAGATGTTGCTAGAAAGTACTTTCAACAACTCATTAGTGCTGTTGATTTTTGCCATAGTCGTGGTGTCACACATCGCGATTTGAAACCAGAAAATCTACTCTTGGATGAAAACGAAGACCTCAAGGTCTCCGATTTTGGACTCTCAGCGTTGCCAGAACAACGCCGAGAGGATGGGATGCTTTTAACTCCATGTGGAACCCCTGCTTACGTGGCACCTGAGGTTTTGAAGAAGAAAGGTTACGATGGTTCTAAAGCTGACTTATGGTCTTGTGGGGTAATTCTCTATGCTTTACTTTGTGGATATCTTCCTTTTCAAGGTGAGAATGTTATGAGAATTTATAGAAAGACTTTTAAAGGCGAATATGAGTTTCCTGAATGGATTTCTCCACATGCTAAGATGTTGATTTCGAATCTTCTTGTTCCTGATCCTAAAAAGAGGTATTCAATTGTTGATATTATGAATCATCCTTGGTTTCGAGTTGGGTTTGTTAGACCCATTGCATTTTCAATGAAGGATTTGAGTATTGAAGACAACAACAAAGATATCAATATTGATTTCAGTGAGATTGGTGAAGATGATGTTGATATTCCTGAATTGGTAATGGTGAAACCGTCTCGTCCTTTTTATAATGCATTCGAGATAATTTCATCGTTGTCACATGGTTTTGATCTTAGGAGTTTATTTGAGACGAGGAAGAGGTTGCCATCGATGTTTATATCAAAGTTTTCGGCTTCAACAATGTTGGAGAAACTTGAGGTGATGGGGAAGAAGTTAAATTTGAAGATAACAGGGAAGAAGGAGTTTGTCGTGAGAATGGAGGGCGCAAGGGAGGGGAGAAAGGGAAAGGTAGCGATGACAATGGAGGTATTTGAGGTGGCGCCGGAGGTGGCAGTGGTTGAGTTTTCTAAGTGTGGTGGAGACACATTGGAGTATGTTAAGATGTGTGAGGAACAATTGAGACCTTCACTCAAAGATATTGTTTGGAGTTGGCAAGGTGACAATCATAATGATAATAATCCTCAATAG 1374 0.3916 MDQQNKKSFQNPRNVIFNKYEMGKVLGQGNFAKVYHCKNLSENESVAIKVIKKERLKKERLVKQIKREVSVMRLVRHPHIVELKEVMATKGKIFLVVEYVKGGELFNKVAKGKLNEDVARKYFQQLISAVDFCHSRGVTHRDLKPENLLLDENEDLKVSDFGLSALPEQRREDGMLLTPCGTPAYVAPEVLKKKGYDGSKADLWSCGVILYALLCGYLPFQGENVMRIYRKTFKGEYEFPEWISPHAKMLISNLLVPDPKKRYSIVDIMNHPWFRVGFVRPIAFSMKDLSIEDNNKDINIDFSEIGEDDVDIPELVMVKPSRPFYNAFEIISSLSHGFDLRSLFETRKRLPSMFISKFSASTMLEKLEVMGKKLNLKITGKKEFVVRMEGAREGRKGKVAMTMEVFEVAPEVAVVEFSKCGGDTLEYVKMCEEQLRPSLKDIVWSWQGDNHNDNNPQ* 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0072 457 CDD CIPK_C 326 440 - -
Mtr4g0072 457 ProSitePatterns Serine/Threonine protein kinases active-site signature. 138 150 IPR008271 GO:0004672|GO:0006468
Mtr4g0072 457 Pfam Protein kinase domain 20 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g0072 457 Pfam NAF domain 324 379 IPR004041 GO:0007165
Mtr4g0072 457 PANTHER - 11 454 - -
Mtr4g0072 457 ProSiteProfiles Protein kinase domain profile. 20 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g0072 457 SUPERFAMILY Protein kinase-like (PK-like) 16 338 IPR011009 -
Mtr4g0072 457 Gene3D Transferase(Phosphotransferase) domain 1 12 317 - -
Mtr4g0072 457 Coils Coil 48 68 - -
Mtr4g0072 457 ProSitePatterns Protein kinases ATP-binding region signature. 26 53 IPR017441 GO:0005524
Mtr4g0072 457 ProSiteProfiles NAF domain profile. 320 345 IPR018451 GO:0007165
Mtr4g0072 457 Gene3D Kinase associated domain 1, KA1 321 445 - -
Mtr4g0072 457 PANTHER CBL-INTERACTING PROTEIN KINASE 16 11 454 - -
Mtr4g0072 457 SMART serkin_6 20 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0072 Mtr-Chr4 900554 902798 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g0072 10 454 CBL-interacting serine-threonine protein kinases AT5G25110 61.798 0.0 568
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Mtr4g0072 Pkinase 1e-77 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0072 - - gmx:100812424 695.271
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g3671 2 50815197 50816423 Mtr4g0072 4 900554 902798 PCT