Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0071 ATGCCTGCCTATGATAACACTTCATCAGTCTCCGGTGGCGACCAAACCGTGTGTGTCACCGGTGCTGGCGGGTTTATAGCTTCTTGGCTTGTCAAACTTCTCTTGGAAAGAGGTTACACTGTTAGAGGAACCGTCCGAAACCCAGAGGATCCAAAGAATGGTCACTTAAAAGAATTGGAAGGAGCAAGAGAGAGGTTAACTTTGCATAAGGTTGATCTTCTTGATCTTCAATCTATCCAATCTGTTGTTCATGGTTGCCATGGTGTGTTCCACACAGCCTCTCCTGTCACTGACAACCCTGATGAGATGTTAGAGCCAGCAGTGAATGGAACTAAGAATGTGATTATAGCGTCCGCGGAAGCTAAAGTGCGACGTGTTGTTTTCACTTCATCGATTGGAACGGTCTATATGGACCCAAATACTAGTAGAGATGTTGTCGTTGATGAATCATATTGGAGTGATTTAGAGCATTGCAAGAACACCAAGAACTGGTATTGTTATGGGAAGACAGTGGCTGAACAATCAGCATGGGATATAGCAAAAGAAAATCAAGTTGATTTGGTTGTGGTGAACCCAGTTGTAGTTCTTGGACCATTGTTACAACCAACAATTAATGCTAGTACAATTCACATACTCAAGTACCTTAATGGTGCTGCAAAAACTTATGTGAATGCAACACAATCTTATGTTCATGTTAAGGATGTGGCATTAGCACATCTTCTTGTTTATGAGACAAATTCTGCTTCTGGTAGATACATATGTTGTGAAACTGCTTTGCATCGTGGTGAGGTTGTTGAAATTTTGGCCAAGTATTTTCCTGAGTACCCACTTCCTACCAAATGTTCAGATGAAAAGAATCCAAGAGTGAAACCTTATAAATTTTCAAATCAAAAGCTGAAAGACTTGGGATTGGAATTCACACCTGTGAAGCAATGTTTATATGACACTGTTAGGAGTCTACAAGAGAAAGGACACCTTCCTATTCCTCCCATGCAAGAAGACTCTGCTTAA 1011 0.4115 MPAYDNTSSVSGGDQTVCVTGAGGFIASWLVKLLLERGYTVRGTVRNPEDPKNGHLKELEGARERLTLHKVDLLDLQSIQSVVHGCHGVFHTASPVTDNPDEMLEPAVNGTKNVIIASAEAKVRRVVFTSSIGTVYMDPNTSRDVVVDESYWSDLEHCKNTKNWYCYGKTVAEQSAWDIAKENQVDLVVVNPVVVLGPLLQPTINASTIHILKYLNGAAKTYVNATQSYVHVKDVALAHLLVYETNSASGRYICCETALHRGEVVEILAKYFPEYPLPTKCSDEKNPRVKPYKFSNQKLKDLGLEFTPVKQCLYDTVRSLQEKGHLPIPPMQEDSA* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0071 336 PANTHER CINNAMOYL-COA REDUCTASE-LIKE PROTEIN 10 329 - -
Mtr4g0071 336 Pfam NAD dependent epimerase/dehydratase family 17 247 IPR001509 -
Mtr4g0071 336 Gene3D - 14 336 - -
Mtr4g0071 336 CDD FR_SDR_e 17 304 - -
Mtr4g0071 336 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 10 329 - -
Mtr4g0071 336 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 14 321 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0071 Mtr-Chr4 883725 887705 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g0071 15 280 Monolignol Biosynthesis Gene Families AT1G80820 73.308 8.58e-138 390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0071 K09753 - gmx:100799994 579.326