LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mtr4g0064	ATGGACAATGAGGAAATCCCATCAGTACCTTCTACCCCTGCAACACCAGGTACTCCTGGTGCTCCTCTTTTTGGTGGCTTCAGGTCTGAGAGAACTGGAAATGGTAGAAAGAACTCACTCCTCAAGAATTTAAAATGTTTTAGTGTTGAAGATTGGACTTTGGAAGATGGAGCCTTACCTAAAGTCACTTGCTCTTTACCTCCCCCTCCTGTCCCTCTTGCCAAAAAGGTTGGAGCTGAGTTTATAGGCACATACATTCTAATGTTTGCTGGAATAGCCACTGCAATTGTGAACCAAAAGATACATAACTCAGAAACACTAATTGGATGTGCTGGAGCAACTGGACTTGCTGTTATGATCATAATATTATCAACCGGTCACATTTCCGGTGCTCATCTTAATCCGGCTGTCACGATTTCATTTGCTGCATTAAAACACTTCCCCTGGAAAAATGTACCTTTGTATATTGCTGCACAAGTTTTGGCATCAATATGTGCTTCATTTACTTTGAAAGGGGTTTTTCATCCATTTATGAGTGGTGGTGTCACGGTTCCTTCAGTTGAATATGGCCAAGCTTTTGCTTTAGAGTTTATCATCAGCTTTAATCTCATGTTTGTTGTCACTGCAGTGGCCACCGACACAAGAGCTGTGGGAGAACTTGCGGGAATCGCGGTGGGAGCCACTGTCATGCTCAACATACTCATTGCTGGGCCTGCAACTGGAGCTTCAATGAATCCAGTAAGAACATTAGGACCAGCAATTGCTGCAAACAACTACAAAGGCATATGGTTATATCTCATAGCCCCTATTCTTGGTGCCCTTGGTGGGGCAGGTGCTTACACTGCTGTTAAGCTTCCTGATGAAGAGTTTAACTCTGAGGTAAAAGCCTCTTCTGCCCCTGGAAGTTTCAGAAGATGA	918	0.4379	MDNEEIPSVPSTPATPGTPGAPLFGGFRSERTGNGRKNSLLKNLKCFSVEDWTLEDGALPKVTCSLPPPPVPLAKKVGAEFIGTYILMFAGIATAIVNQKIHNSETLIGCAGATGLAVMIIILSTGHISGAHLNPAVTISFAALKHFPWKNVPLYIAAQVLASICASFTLKGVFHPFMSGGVTVPSVEYGQAFALEFIISFNLMFVVTAVATDTRAVGELAGIAVGATVMLNILIAGPATGASMNPVRTLGPAIAANNYKGIWLYLIAPILGALGGAGAYTAVKLPDEEFNSEVKASSAPGSFRR*	306

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mtr4g0064	305	ProSitePatterns	MIP family signature.	132	140	IPR022357	-
	Mtr4g0064	305	SUPERFAMILY	Aquaporin-like	72	292	IPR023271	-
	Mtr4g0064	305	PANTHER	BNAA02G36290D PROTEIN	3	291	-	-
	Mtr4g0064	305	PANTHER	AQUAPORIN NIP2-1	3	291	IPR034294	-
	Mtr4g0064	305	PRINTS	Major intrinsic protein family signature	75	94	IPR000425	GO:0015267\|GO:0016020\|GO:0055085
	Mtr4g0064	305	PRINTS	Major intrinsic protein family signature	114	138	IPR000425	GO:0015267\|GO:0016020\|GO:0055085
	Mtr4g0064	305	PRINTS	Major intrinsic protein family signature	151	170	IPR000425	GO:0015267\|GO:0016020\|GO:0055085
	Mtr4g0064	305	PRINTS	Major intrinsic protein family signature	195	213	IPR000425	GO:0015267\|GO:0016020\|GO:0055085
	Mtr4g0064	305	PRINTS	Major intrinsic protein family signature	226	248	IPR000425	GO:0015267\|GO:0016020\|GO:0055085
	Mtr4g0064	305	PRINTS	Major intrinsic protein family signature	263	283	IPR000425	GO:0015267\|GO:0016020\|GO:0055085
	Mtr4g0064	305	Gene3D	Glycerol uptake facilitator protein.	70	296	IPR023271	-
	Mtr4g0064	305	MobiDBLite	consensus disorder prediction	1	29	-	-
	Mtr4g0064	305	Pfam	Major intrinsic protein	73	280	IPR000425	GO:0015267\|GO:0016020\|GO:0055085

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mtr4g0064	Mtr-Chr4	794336	798407	Dispersed/Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mtr4g0064	1	305	Major Intrinsic Protein MIP	AT1G80760	76.129	1.07e-161	451

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mtr4g0064	K09874		-	qsu:112009900	441.039

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Mtr4g0064	4	794336	798407	Mtr4g0064	4	794336	798407	ECH